Oceanihabitans sp. IOP_32: FEZ18_03580
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Entry
FEZ18_03580 CDS
T06249
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
oci
Oceanihabitans sp. IOP_32
Pathway
oci00300
Lysine biosynthesis
oci00550
Peptidoglycan biosynthesis
oci01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FEZ18_03580
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FEZ18_03580
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oci01011
]
FEZ18_03580
Enzymes [BR:
oci01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FEZ18_03580
Peptidoglycan biosynthesis and degradation proteins [BR:
oci01011
]
Precursor biosynthesis
Amino acid ligase
FEZ18_03580
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CbiA
YqeC
SRP54
DUF3440
KTI12
APS_kinase
LpxK
Motif
Other DBs
NCBI-ProteinID:
QFZ53953
LinkDB
All DBs
Position
complement(859087..860550)
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AA seq
487 aa
AA seq
DB search
MKVLKDILYKVAIHDVVGSTGVCINTIRFDSREVKNDDLFVAITGNLIDGHQFIDKAINN
GAKAIVCENLPAHLAPGITYVQVKNSKSALAFMASNFYDTPSENLKLVGVTGTNGKTTVA
TLLYNLFTKAGYKVGLLSTVKVRINNTTYQATHTTPDSLTINKYLKEMNDAGVEFCFMEV
SSHGIHQNRIEGLRFEGGIFTNLSHDHLDYHNTFAEYRDVKKVFFDALPAKAFALVNADD
KNASIMLQNTKAKKYTYALKSYADYKAQILENQFSGLLLKINECEVWTRLIGKFNAYNIL
AVYATAELLGLEKEEVLRLVSDLESVSGRFQYIISDEKITAIVDYAHTPDALKNVLETIN
SIRTKNETLITVVGCGGDRDVSKRPKMGHIASALSTQVIFTNDNPRSENPEAILKAIESG
VEPQNFKKTMTIADRKQAIKTACQLAQPNDIILIAGKGHENYQEINGERFDFDDYKIVQE
FLKQLQK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtattaaaagacatattatataaggtggccattcacgatgttgtgggaagcaca
ggtgtgtgtataaataccattcgttttgattctcgcgaggttaaaaacgacgatttgttt
gttgctattacaggaaacttaatcgatgggcatcagtttatagacaaggccataaataat
ggtgcgaaggcaattgtttgcgaaaatttacccgcacacttagcgccgggaattacttac
gttcaagttaagaattctaaaagtgccttggcgtttatggcttcaaatttttacgatact
ccttcagaaaatttaaagttggtaggggtaactggaacaaatggtaaaactacagtagca
accttattgtataatttattcacaaaagcaggctacaaagtgggcttgttgtctacagtt
aaagtacgtattaataataccacatatcaggctacccataccacaccagactccttaact
ataaataagtatttaaaggaaatgaatgatgctggtgtagagttttgttttatggaagta
agctcgcatggtattcatcaaaacaggattgaaggtttgcgttttgaaggcggtattttt
accaatctttctcacgatcatttagattatcacaacacctttgcagaatatcgcgacgtt
aaaaaagtgttttttgatgcacttccagctaaagcatttgctcttgtaaatgccgatgat
aaaaacgcgtcgataatgcttcaaaatacgaaggctaaaaaatatacctacgcattaaaa
agttatgccgattataaagcacaaattttagaaaatcaatttagtggcttattgcttaaa
attaacgaatgtgaagtgtggactcgtcttatcggcaagtttaatgcttataatatacta
gccgtttatgcgactgcagaattgttaggtttggaaaaagaagaggttttgaggttggtt
agtgatttagagagtgttagcggacgttttcaatatataatttcagatgaaaaaataacg
gccatagtcgattacgcccatacgccagatgccttaaagaatgtactggaaaccataaat
agcatacgcactaaaaatgaaaccttaattactgtagtaggttgtggtggcgatcgagat
gtgtctaaacgcccaaaaatgggtcatatcgcatcggcattaagtacccaggttattttt
acaaacgataatccgcgaagcgaaaaccctgaagctattttaaaagctattgaaagtggt
gttgaacctcaaaattttaaaaaaacaatgaccattgccgatagaaaacaagccataaag
acggcatgccagttagctcaacccaacgatattattttgatcgcagggaaaggacacgaa
aattatcaggaaattaatggcgagcgtttcgattttgatgattataaaatagtacaagaa
tttttaaaacaattgcagaaataa
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