Ochrobactrum sp. EEELCW01: GTN27_01460
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Entry
GTN27_01460 CDS
T07148
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl01501
beta-Lactam resistance
ocl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GTN27_01460
01503 Cationic antimicrobial peptide (CAMP) resistance
GTN27_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocl03036
]
GTN27_01460
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocl02000
]
GTN27_01460
01504 Antimicrobial resistance genes [BR:
ocl01504
]
GTN27_01460
Chromosome and associated proteins [BR:
ocl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GTN27_01460
Transporters [BR:
ocl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GTN27_01460
Antimicrobial resistance genes [BR:
ocl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GTN27_01460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
PYNP_C
Motif
Other DBs
NCBI-ProteinID:
QTN01919
LinkDB
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Position
1:318553..319680
Genome browser
AA seq
375 aa
AA seq
DB search
MKSWKQIALCLLIAAAAVGGWYAYKNKNDVVKAAATGEEAPKGEGGRSAPLVVVEAAGEE
TINNRLTAIGSARALSTVSITPYSSGYMTKLYVKAGDSVKEGDSIAELDAETEKIAVAKA
ETALKDAQTTRQRIAKLRATNTATEVQVVETELAVANAQLALQDAQLALSRRTVRAPISG
IVGILPVNVGNYITAQTSIGRIDDRSKVLIDIWVPERFAPQIKVGQPLTAESTAFPGETY
SGEINAVDNMLDEASRTLHVRAEVPNTQDRLRAGMSFSVTVLFPGDRYPSVDPLAIQWGA
DGSYVWRVEDGVAKRIVARIVQRNSTNILIDGPVKQGDMIVTQGVQTVRDDAPVRVKDEQ
GTALADPVSITRTAG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcctggaagcagattgccttgtgcctgctcatagctgcggctgctgttggcggc
tggtatgcctataagaacaagaatgatgtggtgaaggccgcagcaacgggcgaggaagcg
ccgaaaggcgaaggcgggcgatccgcaccactcgttgttgtcgaggctgctggcgaagag
accatcaataaccgtttgacggctatcggttcggcacgggctctcagcaccgtgtcgata
accccgtactccagcggttacatgacgaagctttacgtcaaggcgggcgatagcgtgaag
gaaggcgactcgattgccgaacttgacgccgagacggaaaagatcgctgtcgctaaggcc
gagacggcgttgaaagatgcgcagacgacacgccagcgcattgcaaaattgcgggcgacg
aacaccgcaactgaagttcaggtggttgagactgagctggcggtcgccaatgcgcagctt
gctttgcaggacgcgcagctcgccttgagccgtcgcacggttcgtgcaccaatctccggt
attgttggtattcttcctgtcaatgtgggtaactacattaccgcacagacttccatcggt
cgtatcgatgaccggtcgaaagtgctgatcgatatatgggtgccagaacgcttcgcaccg
caaatcaaggttggccagccattgactgcggaatcgaccgctttcccgggtgagacctat
agcggcgagatcaacgcggttgacaatatgctggatgaagccagccgtacgctgcatgtt
cgcgcagaagtgccgaacacgcaggatcgtctgcgcgcgggcatgtcgttctccgtcacg
gttctctttccgggtgatcgctatccttcggtcgacccactggccattcaatggggggct
gacggttcctatgtgtggcgtgttgaggacggtgtcgccaagagaattgtcgcgcgtatc
gttcagcgcaattcaaccaacattctcatcgatggtccggtgaagcagggcgacatgatc
gttacgcaaggtgttcaaaccgtgcgcgatgatgcgccggtacgtgtaaaggacgagcag
ggtacggcactggctgatcctgtttcgataacacgtactgcaggatga
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