Ochrobactrum sp. EEELCW01: GTN27_05855
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Entry
GTN27_05855 CDS
T07148
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl01501
beta-Lactam resistance
ocl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GTN27_05855
01503 Cationic antimicrobial peptide (CAMP) resistance
GTN27_05855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocl03036
]
GTN27_05855
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocl02000
]
GTN27_05855
01504 Antimicrobial resistance genes [BR:
ocl01504
]
GTN27_05855
Chromosome and associated proteins [BR:
ocl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GTN27_05855
Transporters [BR:
ocl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GTN27_05855
Antimicrobial resistance genes [BR:
ocl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GTN27_05855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
YknX_C
BSH_LcnD
BSH_CzcB
BSH_CusB
RND-MFP_C
CzcB_C
BSH_YknX
BSH_Fcp1
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QTN04041
LinkDB
All DBs
Position
1:1217593..1218777
Genome browser
AA seq
394 aa
AA seq
DB search
MIKRLILATIFLVIVVGGLVGFNLFRSQAIKDFFANMQQPAQTVSTVTVEPGVWKPGVEA
IGTANALNGVDLTVQLDGLVQKINFKANQEVKEGDLLLQLEDSIQKADLAAAEAEAVLAQ
QNLKRADTLRTRGVGAVSNVDTTASVANAAGAVVEKMRATLAQKSVKAPFSGVIGISKVD
LGQYLTPGTVIATLQNTDVMRIDFTVPEQSLASIKLGQTVKVGSTAEALNFTGTIIGIDP
KIDPTTRLVSVRAEVQNPDHELTPGQFVQVRVELPEEDNIIALPQTTIISSLYGDYVYAV
RPEQKQEGAKAAEGDNTAKAPAADAKPEDGEKQVAQQVFIKLGRRYSGIVEVTSGLKAGD
IIITAGQNRLSPGVPVNIDNTVNPIPAGQPADKQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcgccttattctggcaacaatattcctcgtgatcgtcgttggaggcctcgtt
ggctttaacctgttccgatcacaggccatcaaagacttctttgccaacatgcagcagccc
gcccagacggtttcgaccgtgacagtggagccgggcgtatggaagcctggtgtggaagcc
atcggcacggccaacgcgctcaacggcgtcgatctgaccgtacagcttgacggcctcgtg
cagaagatcaacttcaaggccaatcaggaagtcaaggaaggcgacctgctgcttcagctc
gaagacagcattcagaaggcggacctcgcagccgccgaagctgaagccgttcttgcccag
cagaacctgaaacgcgccgatacgctgcgcacgcgcggtgtcggtgctgtatcgaatgtc
gatacgaccgcatcggtcgccaatgccgccggtgcggtggtggaaaagatgcgtgcaacg
ctggcgcagaagtcggtcaaggctccgttctcaggcgttatcggcatttccaaggtcgat
ctcggccagtatctgacgcccggcacggtcattgccacgctgcagaacaccgacgtgatg
cgcatcgacttcactgtcccggaacagtcgcttgcctccatcaagcttggacaaaccgtc
aaggtcggttcgactgcagaagcactcaacttcaccggtacaattatcggtatcgatccg
aagatcgacccgacgacccgtctcgtttcggtgcgcgcggaagtacagaatccggatcat
gaactgacaccgggtcagtttgtgcaggttcgcgtcgaattgccggaagaagacaatatc
attgctctgccgcagaccacgatcatctccagcctgtacggcgactatgtctatgcggtc
cgtccggaacagaagcaggaaggcgcgaaggctgccgaaggcgacaacaccgccaaggct
cctgctgccgatgccaagccggaagatggcgagaagcaggtcgcacagcaggtcttcatc
aagcttggacgccgctattccggcattgtcgaagtgacgagcggcctcaaggctggagac
atcatcatcacggcaggccagaaccggctctcgcccggcgtaccggtgaacatcgacaac
accgtcaatccgattccggccggccaaccggctgacaagcaatag
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