Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364620
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Entry
139364620 CDS
T10872
Name
(RefSeq) suppressor of cytokine signaling 7-like isoform X1
KO
K04699
suppressor of cytokine signaling 6/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139364620
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
139364620
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Gene cluster
GFIT
Motif
Pfam:
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
139364620
NCBI-ProteinID:
XP_070957610
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Position
13:37045953..37061959
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AA seq
815 aa
AA seq
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MNNAQDMSPDFVLMRLVSAAEYDRLDDENLTLGGGVVSGFGKAVLGNHGNNINTGFEFDP
NNPTAGPAIPSNPSPHYSSQVESQTGALDSGLMLTRPSASDAPQPPDFAVAHRFDFPHGS
GRGSRAQLMVFQNLLRTSDGVFECGLQQPPGFQVSEVDKQEASSVCVMMTSDNNMDVQHQ
RLQWHPIMKLSKVVTDAGDLAGEGDGLCHRHRLVTDAMDWPPLLDKSLCFDILDPRKTCS
TGDTNYHHHLDDTVLNLARRLGELGQASEMLLKERGEMTRCSCQSILASATGGMGPGEDP
SETSDALLVLEGLDSEEVGELGMGGEEFKCGVPGQEGETDTGQDGRGAFSSGSLTGLMRQ
VHRLAGEVRACGPQVCPSPLDSLGSAAALTSSSLSLASNTTGQQVVEASATLSGTLPSQD
PPSQTSQSLPQSRATTPKLGVMLRAASPLVVEEAAGGEKTTRGKSRKGSLKIRLSKLFRT
KSSSGSSRHLDKRPSLASSTSSGGSQMDVWGSGSTSTDQDTGSKLQHSRPQSAFSPVAFG
PAFTGETVSLVDVDISRRGVNSLQPPTPPPPPRRSLSLLDTFLRGLPRPIPLPGDGQNQS
RVDQRPMLCPLSCPDASSFATSLRELEKCGWYWGPMNWEDAEMKLKAKPDGAFLVRDSSD
PRYILSLSFRSQGVTHHTRMEHYRGTFSLWCHPKFEDRCHSVVEFIERAIMHSKNGKFLY
FLRSRVPGLPPTPVQLLYPVSRFSSVKSLQHLCRFCIRQLVRIDHIQELPLPTPLIVYLR
RFYYYDPEEEMYMSVKEMGRDTTTQPATGQPESQT
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgcgcaagatatgtctcccgattttgtcttgatgcgcttggtttctgcggct
gaatatgaccgattggacgatgagaatttgacgttgggcggtggagtggtttccggattc
gggaaagctgtcttgggtaatcatggcaacaatatcaacactggatttgaatttgatccg
aacaaccccacagcaggcccagcgattccgagcaatccctccccgcactatagttcacag
gtcgagagccagacgggagcccttgacagcggcttgatgcttactcgaccctcagcttct
gatgcgcctcaaccaccagacttcgccgtggctcaccgtttcgatttccctcatggctcg
ggcagagggtcgcgggctcagctcatggtgtttcagaacctccttaggacaagcgacggt
gtttttgaatgcggcctccagcaacctcctggcttccaggtaagtgaggttgataaacag
gaagccagttctgtctgtgtcatgatgaccagtgacaacaacatggatgtgcaacaccag
aggcttcagtggcaccccattatgaagctgtccaaggtggtcacagatgctggtgacctg
gctggagagggagatgggctctgccaccggcaccgcctggtcactgatgccatggactgg
cctccgctcctggacaagtctctctgcttcgacatcctggaccccaggaagacctgttca
acaggggacaccaactaccaccaccacctggacgatacggtgctcaacctggcccggagg
ctgggggagctgggccaggcctcagagatgctgctgaaggagaggggagagatgactcgt
tgttcctgtcagagcatcctggcttcggcaactgggggcatgggccccggagaggaccct
agtgaaaccagtgacgccctcctggtgctggagggcctggactcggaggaagtgggggag
ctggggatgggcggggaggagtttaaatgtggtgtccccgggcaggagggcgagacggac
acggggcaggacggacggggggctttctccagcggttccctcacgggactaatgaggcag
gtacacaggctggccggggaggtccgtgcctgtggcccccaggtgtgtccttccccgctg
gattccctgggctctgctgcagccttaacatcttcctccctgtctctggcctctaacacc
acaggccagcaggtggtggaagcctccgccaccctatctggcaccttaccctcacaggac
cctcccagccaaacctcccagtccctgccccaaagcagggccacaacgccgaagttaggg
gtgatgttgagagccgcctcacccttagtagtagaggaggcagcagggggcgagaagacg
accagagggaagtccaggaaaggctctctgaagatccgtctgagcaaactattccggacc
aagagcagcagcggctccagtcgccacctggacaagaggccctcgctggcctcctccacc
tcctccgggggaagccagatggatgtgtggggctctggatccaccagcacggaccaggac
acagggagcaaactccagcactccaggccccaaagtgccttctctccggtggccttcggt
cctgccttcaccggtgagactgtgtcccttgtagacgtggatatttctcgtagaggggtg
aactctctgcaacccccgacacctccacctccgcccaggcgaagcctcagtctgctggat
acgttcctgcggggcctcccccggcccattccgctgcctggcgacggccagaaccagtct
cgggtggaccagcgccccatgctgtgcccactgagctgccccgatgccagcagctttgcc
accagcctccgggaactggaaaaatgtggctggtactggggtcctatgaactgggaggat
gcggagatgaagctgaaggccaagccagacggagcgttcctggtgagggacagctctgac
cctcggtacatcctcagcctcagcttccgctcccagggagtcacccaccacacacgcatg
gagcactacagaggaaccttcagcctctggtgtcacccaaagtttgaggaccgctgtcat
tctgtggtggagtttatagaacgagccatcatgcactccaagaatggaaaattcctctac
ttcctgcgctcacgggtcccaggcctccccccgaccccggtccagctactctacccagtg
tcccgcttcagcagtgtcaagtccctgcagcacctctgtcgcttctgcattcgccagctg
gtccgcatagaccacatccaggagctccccctgcccacgcccctcatagtctacctgcga
aggttctactactacgatcctgaggaggagatgtacatgtcagtcaaggagatggggcgg
gacacgaccacccaaccggcgactggccagccggagtctcaaacgtag
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