Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365752
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Entry
139365752 CDS
T10872
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Protocadherins
139365752
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139365752
NCBI-ProteinID:
XP_070958937
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Position
14:complement(7052318..7054947)
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AA seq
822 aa
AA seq
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MTKRMGYRDWRWLALWWHHFFLLWTTIDGQTRYTISEELKQGSVVGNLAKDLGLGLSEFF
DRKLRVASEAGKQYFSVDAGKGELVVNERIDRETLCGQSASCVLPLQVVIENPLQLYRVE
VEIQDINDNSPSFPSKQHPLEIAETTAAGVRFPLESAQDPDVGSNSLKSYILSKDECFTL
KVKELSGGRKVPELVLTKALDREKKTVHHLLLTVVDGGNPVRSGTSQITITVLDVNDNVP
VFENAVYKVSVSEKSAEGTFIVNPRATDADDGQNGQIEYSFGVHTSDSVLSVFEIDFLTG
KIILKGQLDFESAANYEIDISAKDKGSPRMEGHCSVQVDVADVNDNSPEIILTSKPSPLR
EDAPSGTVVALIGARDLDSGNNGKVTLQLPRGYPFSLKPSFSNNYALVTSGVLDRESFSE
YNIEITATDSGSAPLTTKKTITVSIIDVNDNPPKFSQSSYNVYLKENGLPGSMLSSVSAS
DLDFGDNAKISYSILDSKAQDVSVSSYVYMNTENGSIYSMHSFDYEKLKVFQILVQAKDH
GSPSLSSNVTVHVFILDQNDNAPAVIYPSAALGSLSHQKMPRFAKAGYLVTKVTAVDADS
GHNAWISYKLAETTDASLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEMQDDGEPVQSATV
TLAILVEDGLHEPILDLRQKAPEPSKKSGRITLYLIISLASVSVLSLVTFVILAVKCVRN
SRGSGSCCMRWDDFDGNKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDNAWTFESQQVRSEL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggctggctctttggtggcatcatttc
tttctcttgtggactacaatagacggacagactcgctacaccatctcggaggaactgaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgggactatctgagtttttt
gaccgtaagctgcgtgtcgcctctgaggctggtaagcagtatttcagcgtggatgcgggg
aagggcgagctggtcgtgaatgagagaatagacagagagactttatgcggacaaagcgcc
agctgcgttttacctctgcaggttgtcattgagaacccgttacaactgtatcgtgttgag
gttgaaatacaagatataaatgataattctccaagtttcccttccaaacaacacccgtta
gagatagctgaaacaactgcggcaggtgtacgttttcccttggaaagcgcacaagaccca
gatgtggggagtaattctctaaagtcatacattcttagtaaagatgaatgttttacttta
aaggtaaaagaactctctggcggcagaaaggtaccagaactagtcttgaccaaagctctg
gaccgagagaaaaaaactgtccatcatctattgttgacagttgtagacgggggcaaccca
gtgagatccggaacctcgcagataactattacagttctcgatgtaaatgataatgtgccc
gtttttgaaaatgcagtgtataaagtttctgtaagtgaaaaaagcgcagagggcactttc
atagttaatcctagagcaacagacgccgatgacggacagaatggacagatagaatattcg
ttcggtgtccatacgtcagactcggtgctatctgtttttgagattgattttctaacagga
aaaatcattttaaaagggcaattagattttgagagcgctgcaaattatgaaattgacatc
agtgcgaaagacaaaggtagccctagaatggagggacattgtagtgtgcaggtagatgta
gcagatgtaaatgacaactctcccgaaataattttaacctccaaaccaagtcctctgcgt
gaggatgcaccgagtggcacggtagtagctttgatcggtgcccgggacctagactccggt
aataacggtaaagtgacgttacagctcccacgaggttatcctttcagtctgaaaccttcc
ttttctaataattacgcactggtcacaagtggtgttttagacagagagagtttctcagag
tataatattgagataacagccactgattcgggctccgctcccctgactaccaagaaaact
ataacagtcagtatcattgatgtcaacgacaacccccctaaattcagccagtcctcatat
aatgtatatttaaaagagaatggactaccaggctcaatgctatcctcagtatctgcatct
gacctggatttcggggataatgccaagatctcctactccatcctagactccaaagcgcag
gacgtttctgtgtcttcctatgtgtacatgaacactgaaaacggcagtatctacagtatg
cactcgtttgactatgagaaactaaaggtgtttcagattctggtgcaggccaaggaccac
ggctctccctctctgagcagcaacgtcactgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctccgctgccctgggctcgctctctcaccagaagatg
ccccgcttcgctaaagcaggctacctggttactaaggtaaccgcagtggacgcagactcg
ggccataacgcctggatttcatataaactggcggagaccacagacgcgtctctgttcagt
gtcaatctttacacgggggaggtgaggactaaacgcgctgtgtccgaacaggacgactcc
tctcagaggctgcttatagagatgcaagatgacggggagccagtccagtccgccacggtc
acattggccatactggtagaggacgggctccacgaacccatcttggaccttcgtcagaaa
gcgccagagcctagcaagaaaagcgggagaatcaccctgtatttgattatctctctggcc
tcggtgtccgtgctgtctctggtgacttttgtcatcttagcagtcaagtgcgttagaaac
agcaggggcagcggtagttgctgcatgagatgggacgactttgacggcaacaagaacccc
aacagaaacctgcagattcagctcaacactgacgggccgattaagtacgtggaggtcctg
ggaggggatatgttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagag
ttcagtgatttcaccttcgttaagcccagcagcaccactgactttaaggagatgatcaac
gtcctagacgcgtctttacccgacaacgcctggacctttgagagccagcaggtgagaagt
gaactgtag
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