Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365753
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Entry
139365753 CDS
T10872
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Protocadherins
139365753
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139365753
NCBI-ProteinID:
XP_070958938
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Position
14:complement(7063818..7066506)
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AA seq
824 aa
AA seq
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MTKRMGYRNWRWLALWWRHFILLWTTIDGQTRYTIPEELKQGSVVGNLAKDLGLGLSEIF
DRKLYVASEAGKQYFNVDAGKGELVVNERIDRETLCGPSASCVLPLQVVIENPLQLHRIE
VEIRDINDNSPNFLTKDRVLKMAELTAVGARFPLKSAEDPDVGSNSLKSYILSKDECFSV
KVKDIEGGRKIPELVLEKPLDREKKAVHELLLTALDGGTPARSGTSQITVTVLDNNDNNP
VFQKAVYNVRVNENSEKGTSLIKLEATDSDEGVNGEIEYSFGEHTLESVLSVFDIDAVTG
EMFLKGELDYESAAYYRIDITAVDKGIPEMEGHCRVQVEVTDVNDNAPEIVLTSKPSPVR
EDAPSGTVVALISARDLDSGNNGKVTLQLTKGHPFSLKPSFSDNYALVTSGVLDRESFSE
YNIEITATDSGSPPLTTKKTIPVSIIDVNDNPPKFSQSSYNVYLKENGPPGSMLSSVSTS
DLDFGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSYDHEKLKVFQILVQAKDH
GSPSLSSNVTVHVFILDQNDNAPAVIYPSAALGSLSHQNMPRSAKAGHLVTKVTAVDADS
GHNAWISYKLVEATDTSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEIQDDGEPVQSTTV
TLAILVEDGLHEPILDLRQKAPEANKKNPRITLYLILSLASVSVLSMVTFIILAVKCVRN
SRSSGSCCMRRDDLDSYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVRSDVGL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgaaactggagatggttggctctttggtggcgtcatttc
attctcttatggactacaatagacggacagactcgctacaccatcccggaggaactgaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgggactctctgagattttt
gaccgtaaactgtatgtcgcctctgaggctggcaagcagtatttcaatgtggatgcgggg
aagggcgagctggtcgtcaatgagagaatagacagagagacgttatgcggaccaagtgcc
agctgcgttttacctctgcaggttgtcattgagaacccgttacagttgcaccgtattgag
gtggaaatacgagacataaatgacaattctcctaatttcttaacaaaagatcgtgttctg
aaaatggctgaattgacagctgtaggcgcgcgttttccgttgaaaagtgcagaggacccc
gacgtgggaagcaattcacttaaatcctacattcttagtaaagacgaatgtttcagtgta
aaagttaaagacattgaaggaggacgaaaaatcccagagctagtgttagagaagccactg
gacagagagaaaaaagctgtccatgagctattattgacggctctagatggaggcactccg
gctaggtctggaacttcacagatcacggtcactgtccttgataataatgacaataatccc
gtatttcagaaagctgtatataatgtaagggttaatgaaaatagcgaaaagggcacttcc
ttgattaagcttgaggctactgactcagacgagggtgtcaacggggagatagaatattca
ttcggcgagcatacactagagtcagtgttatctgtgtttgatattgatgcagtaacgggg
gaaatgtttctaaaaggggaattagattatgagagtgcagcttattatcgtatagacatt
actgcagtagataaaggcatcccagaaatggagggacactgtcgggtacaggtcgaagta
acagacgttaatgacaatgctcccgaaattgtcctcacctccaaacctagtccagtgcgc
gaggacgcaccgagtggcacggtagtggctttgatcagtgcccgtgacctagactccggg
aataacggtaaagtaacgttacaacttacaaaaggacatcctttcagtttgaaaccgtca
ttttctgataattatgcactggtcaccagtggtgttttagacagagagagtttctcagag
tataatattgagataacagccactgattcaggttcccctcccctgactaccaagaaaact
ataccagtcagcatcattgatgtcaacgacaacccccctaaattcagccagtcctcatat
aatgtctatttaaaagagaatggaccaccaggctcaatgctctcctcagtatctacatct
gacctggatttcggggataatgccaagatttcctactccatcttagactccaaagtgcag
gatgtgtctgtatcctcctatgtgtacataaactctgacaacggcagcatctacagcatg
cactcatacgaccatgagaaactgaaggtgtttcagattctggtgcaggccaaggaccac
ggctctccctctctgagcagcaacgtcactgtccatgtttttatcctggaccagaatgac
aatgcccccgctgttatttacccctccgctgccctgggatcgctctctcaccagaacatg
ccccgctccgctaaagcaggccacctggttactaaggtaacggctgtggacgcagactcg
ggccataacgcctggatctcatataaactggtggaggccacagacacgtctctgttcagt
gtcaatctttacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagagatacaagatgacggggagccggtccagtccaccacggtc
actttggccatactggtagaggacgggctccacgaacccatcttggacctccggcagaaa
gcgccagaggctaacaagaaaaacccgagaatcaccctgtatttgattctctctctggcc
tcggtgtccgtgctgtctatggtgaccttcatcatcttagcagtcaagtgcgttagaaac
agcaggagcagcggtagttgctgcatgagacgggacgacttggacagctacaagaacccc
aacagaaacctgcagattcagctcaacactgacgggccgattaagtacgtggaggtccta
ggaggggacatgttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagag
ttcagtgatttcaccttcgttaagcccagcagcaccactgactttaaggagatgatcaac
gtcctagacgcgtctttacccgacagcgcctggacctttgagagccagcaggtgagaagt
gacgtcggtctataa
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