Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366679
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Entry
139366679 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A-like
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139366679
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139366679
04090 CD molecules [BR:
ocla04090
]
139366679
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139366679
CD molecules [BR:
ocla04090
]
Proteins
139366679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
139366679
NCBI-ProteinID:
XP_070960466
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All DBs
Position
15:13988954..14010498
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AA seq
674 aa
AA seq
DB search
MRVHFSTSWIFQGWIIHLVLTLCAQRALSRPTCSQQQYLKEKRCCSRCEPGSYVFAECAA
YSDTKCRPCGSDEYQPDWTNETKCLPQKFCDTGKGFNRVRPSNRLAAVPCQCKPGLQCSP
INCEFCEKIPTCGPGYGLETDTESGRRTCVACKRGHFSPNTSMEPCSLWTNCNGLGKSDK
QTGSDQTDAVCGPHLSGASTSWVLLWVLSVITVLCLLILLLFCYKEKLRLLSVNLRSCVQ
NLKRTRIQQETLAPLYHSGVVGGGLEGQSGTLRETTCLIGLAHSPSETPHTCPTATPGDR
VKLPPTKEMEEERKDEERREEEDEGVGSEGSGEAEEVSEDGVCEEVVPEDVCVSPLWAGS
CVCVLSVREPLEVGDNEDCSQAVNPGTLGTCSCGGEGESKGGEKDERKDGGRERAKVVEG
LQVKSSERSSHTSSPFSLSPTSSSLSPADHSCDLYPPLTQVRSEVKGQLIDSSQGKGEEL
YRLNCSISSTLTTKATPPLTSTISPYPSVTSVTVGDRQSELTSEASSSEQNQGLSWRDIG
GNKLSSGGSELDCAPESLQSQLTEPALTSGQVTGNNNTTFISSGQVMNFNADVIVVYVSQ
TSLGNEGEGPDDAFGSPVQEQANERAPMFQSSISSKSVSHSSVASSVNSITHNPLRQEDN
LPVQEVTDQWPREN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcacttctccaccagttggatatttcaaggctggatcatccatctggttctc
actctgtgtgcacagagagccctgtctagacccacctgttcccagcagcagtaccttaaa
gaaaagagatgttgcagcaggtgtgaaccagggtcctatgtgtttgcagagtgtgctgct
tactctgacaccaagtgtcgtccgtgtggcagtgatgagtaccagcctgactggaccaac
gagaccaagtgtctgcctcagaagttctgtgacacaggtaagggctttaaccgtgtgagg
cccagtaaccgcctggctgcagtaccctgtcagtgtaaacctggtttacagtgttctccc
atcaactgtgagttctgtgagaagattcctacctgtggaccaggatatggactggagact
gacactgagtcgggcaggagaacttgtgttgcgtgcaagagaggacatttctctcccaac
acctctatggaaccatgcagtctgtggaccaattgtaatggtctggggaagagtgacaag
cagactgggagcgaccagactgatgctgtatgtggaccccatctctctggtgcctctacc
tcctgggtcctactgtgggttctgtcagtcatcactgtcctttgtctcctcatcctcctg
ctcttctgctacaaggaaaaacttcgactactctcagtgaatttacgatcatgtgtccag
aatctgaaaaggaccaggatacagcaggagactctggcccctctctaccacagtggcgtc
gtgggagggggactagagggtcagagcggcactctgcgtgagacaacctgtcttattggc
ctggctcacagcccctcagaaacaccacacacctgtcctacagctacacctggtgaccgg
gtcaaactgccacccaccaaagagatggaggaggagaggaaggacgaggagaggagggag
gaggaggatgagggggtggggagtgaagggtcaggggaggcagaggaggtttctgaggat
ggtgtgtgtgaggaggttgtaccagaggatgtgtgtgtgtctccactgtgggctggctcc
tgtgtgtgtgtgttgtctgtcagggaaccattagaggtaggggataatgaagactgtagc
caggctgtcaaccctggaaccctcgggacctgctcctgtggaggagagggggagagcaag
gggggagagaaggatgaaaggaaagatggagggagggagagggccaaggtggtagagggt
ctgcaagtgaagagctctgagaggagcagccatacctcctccccattctccctctctccc
acctcctcctctctctcccccgctgaccattcatgtgacctctacccgccgctgacccaa
gtcaggtcagaggtcaaaggtcagcttattgacagctcacaggggaaaggggaggagcta
tacagactgaactgcagcataagctccaccctcaccacaaaagccacgccccctttgacc
tccactatatctccttacccctcggtgacctctgtaactgtgggtgaccggcaatccgag
ctgacctctgaagcctccagcagtgagcaaaaccagggactttcttggagggacattggg
ggaaacaagctctcgtctgggggctcggagctggattgtgcccctgagagcctccagagt
caactcacggaaccagcactcacctcaggtcaggtgacggggaacaacaacaccaccttc
atctctagtggtcaggtgatgaacttcaacgctgacgtcatcgtcgtctacgtcagccag
acgtctctaggcaacgagggggaggggccagacgatgcgttcggaagccccgtccaggaa
caggccaatgagagagctccgatgttccagagttccatctcctccaaaagcgtcagccat
tcgtcagtggcgtcctcagtaaactccattacccataaccccctacggcaggaggacaac
ctgccggttcaggaagtgactgatcagtggccgagggagaattga
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