Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366760
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Entry
139366760 CDS
T10872
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
139366760
Enzymes [BR:
ocla01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
139366760
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GFIT
Motif
Pfam:
Sulfotransfer_3
DUF4962
Sulfotransfer_1
Motif
Other DBs
NCBI-GeneID:
139366760
NCBI-ProteinID:
XP_070960563
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Position
15:complement(27550110..27554278)
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AA seq
1219 aa
AA seq
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MSWTMAKKWIGCYIFLLALLAVGMAFSGVFNASEKYLFTDDLVPLKLTQGKASEHRKLQS
TDSHPNLYFNQVDEQLMRQRSSSTHSHIFKVIRAAVLTMLSNVPLYMPPAKHEEFTSKWN
EIYGNNLPPLALYCLLCPEDSGALQFLMKFMDRMANYPDWKVTSAPNDEVPLAHSLTGFA
TAYDFIYSFLDEHRRDVYLKRIRSETEELYETSKYRGWGKQYLQNHQTTNILAILTGAIV
VGAHDDPETMVWKQVSVNYMEKTMFLLNHVVDGSLDEGVAYGSYTAKSITQYVFLAQRHF
NIDNTQNNWLREHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDTFVIRNGTGN
WLAQQIRKHRPKDGPMGQSSAQRWTTLHTEYIWYNAHLTAQPPHGFGKARMHIFSNWGVV
TYGAGLPNGQGNTFVSFKSGKLGGRAVYDIVHAKPYSWLDGWNSFNPGHEHPDQNSFTFA
PNGQVFVSEALYGPKYSYLNNVLVFGPSPSSQCNAPWEGQLGECAKWLRWTDEGVGDAAG
ELIAASSHRDTMFVSGEAAPAYSPAMRLRSVYRALVLLNSQTLLVLDHVEKLDDSPITSQ
SAFFHNLDIDFKYVPYKFMDKYNGALMDVWDAHYKMFWFDSQGLSPDTRIQEAEQAAEFK
KRWTQYVNVTFPMRATVSRVAYVMHGPYVKVSNCRFLDSSKNGVRLSLVINNTEKIVSVV
TNYKDIGTRLSYLGFGGYAKVEDRHQIIRYGLGTQLVPKQNTVDNQLFDFGFTVNVIAGV
ILCVAIVFLTLQRKFYVCFSRLMRYALFSVLILWIAALLFVSNTCDQLLCGVKWKGVSTD
PEVSKQIRLYDQHRFALPTVVITTLPGSGSEILKNLFDNSSDFVYIRVPTEHVDIPETEF
EFDSLVDACEWFRTDALRGRFKIIQGWLHSLVHNTKLHLQNIQLVESSRAKLPQRAPGPG
SDRRKRTRRKEPAAELRGKMRGSLDRDAEYVREMRRHVSEYPNARVVLNMRSGSWGLKLP
FLQEVVGPSLRTINVVRDPRAWIYLMLYNSKPSFYSLKNIPQHLSLIFKEDGNSSSTRDR
CPVSAPEFRMIRRLLSHSEASAVLLLAHLWLAHTAAVLRVSGSLQAEAYLQVRFEDIVTF
PQETAERIHRFLGVPVTPAALNQLMFTTSTNLYNLMYEGDISPANINIWRQNMPRKDIRL
IEDTCGVVMKRLGYSRFIS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggaccatggcaaaaaagtggatagggtgctatatatttttactggcactcttg
gcagtgggaatggccttttcgggtgtattcaatgcgtccgaaaaatatctttttacggat
gatttggtgccgctcaaactcacccagggtaaagcatcagagcatcgaaaacttcaatct
accgattctcatcccaacctgtatttcaaccaagttgatgaacagcttatgaggcaaaga
tcgtccagcacacacagccacattttcaaagtaatcagagcagcggtcctgaccatgctg
tccaatgtgcccctttacatgccccctgcaaaacatgaggagtttactagcaagtggaat
gagatttacgggaacaacctacccccccttgctctgtattgcctgctgtgcccagaggat
tcaggtgccctgcagtttctcatgaagtttatggatagaatggcaaattacccggactgg
aaggtgaccagtgctcccaatgatgaggtgcccttggcacactcacttactgggtttgcc
accgcatatgactttatttactcgttcctggacgagcaccgacgggatgtttacctcaag
agaattcgctctgagacagaggagctgtatgaaacatctaagtataggggttgggggaag
cagtatctccaaaatcatcaaaccactaacatattagccatcttgactggggctattgtg
gtcggcgcccatgatgacccagaaacaatggtttggaaacaggtgtcagtcaattatatg
gagaagaccatgtttctcctaaaccacgttgtagacgggtcactggatgagggcgtggca
tacgggagctatacagccaagtcgatcactcagtatgttttcttagcacaacgtcatttc
aacattgacaacacacagaacaactggctgcgggaacatttctggttctactatgccact
cttctgcccggctttcagaggactgtgggcatagccgactccaactacaactggttctac
ggcccagagagccagctggtgttcctagacacatttgttatacgaaacggcactgggaac
tggctagcccagcagattagaaagcacaggcccaaagacggtcccatgggtcagtcttct
gcccagcgctggactaccctacacactgagtacatctggtacaatgcccatctcactgca
caacctccccatggctttggtaaagccaggatgcatattttctctaactggggtgtggtg
acgtacggagccgggctgcccaacggtcagggaaacacatttgtctcctttaaatccggg
aagctgggtggccgtgccgtgtatgacatcgttcatgcaaagccctattcatggctggac
ggctggaatagcttcaacccaggccacgagcacccggaccaaaactccttcacttttgcc
cctaacggacaggtatttgtgtctgaagcactttacggacctaagtacagttatctgaac
aatgtgctggtgttcggcccctctcccagcagccagtgtaacgctccatgggagggccag
ctgggggagtgtgctaaatggctgcgctggacagatgaaggggtaggggatgctgctggg
gagctgatcgctgcctcctcccatagagacactatgtttgtaagtggggaggcagcccca
gcttactctcctgccatgcggctgaggagtgtctacagggcccttgtgctgctcaactcc
cagaccttgctagtactggaccatgttgagaagctggacgattcgcccatcacctcgcag
agtgcgttcttccacaacctcgacattgacttcaaatatgtcccctataaattcatggac
aagtacaatggggcgttgatggatgtgtgggatgctcattataaaatgttctggtttgac
agtcagggtctcagcccagatactaggatacaggaggccgagcaggctgcggagttcaaa
aagaggtggacacagtatgttaatgtcactttccccatgagggccacagtaagccgagtg
gcctatgtgatgcatggaccttatgtcaaagtgtccaactgtcgatttctggacagtagc
aaaaatggtgtcagactatctctagttataaacaacacagagaaaatagtttcagttgtt
acaaactataaagacataggaacaagattaagttatttaggatttgggggttatgccaaa
gtggaagacagacatcagatcattcgatatggcctggggactcaactggttccgaaacaa
aacacagtggacaatcagctgtttgattttggattcacagtcaatgtgatagcgggagtg
atactttgtgttgctattgtttttttgaccctgcagagaaagttctatgtgtgcttcagt
agactgatgcgctatgctctgttctcggtgctcatactgtggatagctgcgttgttgttc
gtgtcaaacacctgcgatcaactcctatgtggggtcaaatggaaaggtgtcagcactgac
ccagaggtcagcaaacaaatcagactttatgatcaacatcgctttgccctgccaaccgtt
gtcataacgaccctgcctggctcaggatctgaaatacttaagaacctttttgacaacagc
tccgactttgtttacattcgggtccccacggagcatgtagatattccagagaccgagttc
gaatttgactcgctggttgatgcctgtgagtggttcagaacggacgccctgcgcggacgc
tttaaaatcatccagggctggctgcactctctggtccacaacaccaagctgcacttgcag
aacatccagctagtggagagtagcagggccaagctgccccagagagccccaggccccggc
agtgacaggaggaagaggaccaggaggaaggagcctgccgccgagctgaggggcaagatg
aggggcagccttgatcgggatgctgagtacgtcagggagatgaggcgccacgtcagtgag
taccccaatgcccgcgtggtcctcaacatgaggagtggaagctgggggctcaaactcccc
ttccttcaggaggtggtgggcccgtccctgaggaccatcaatgtagtcagagacccccgg
gcgtggatctatctcatgctctataacagtaaacccagcttttactcccttaaaaacatt
cctcaacacctgtcgctgatattcaaggaggacggtaacagtagcagtaccagggacagg
tgcccagtctcagcccctgagttcagaatgatccggaggctcttgtcccattcggaggcc
agcgccgtcctcctgctggctcacctgtggctggcacacactgctgcagtgctccgggtc
agtgggagcctccaggcagaggcctacctccaggtgaggtttgaggacatagtcactttc
ccccaggagacagctgaaaggatccacaggttcctgggggtgccggtcacaccggcggcc
ctcaaccagctcatgttcaccacctccacaaacttgtacaacctgatgtacgagggggac
atatcaccagccaacattaacatatggaggcagaacatgcctcgcaaggacatcagactg
atagaggacacatgtggggtggtcatgaaaagacttgggtactccaggtttatcagctag
DBGET
integrated database retrieval system
