Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367674
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Entry
139367674 CDS
T10872
Name
(RefSeq) transcription factor E2F1-like
KO
K17454
transcription factor E2F1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
ocla04137
Mitophagy - animal
ocla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139367674
09143 Cell growth and death
04110 Cell cycle
139367674
04218 Cellular senescence
139367674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139367674
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
139367674
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Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
Motif
Other DBs
NCBI-GeneID:
139367674
NCBI-ProteinID:
XP_070962058
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Position
16:complement(48270616..48274935)
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AA seq
433 aa
AA seq
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MSETLLSGQTSEDLLVDFESLLNAGSIGLSEDHQIVIISTPSNVGFNSAVPSNTGEILLF
ATPQGPADVVQDQRRPTLGRPPVKRKLDLDSDHQYVSTSRPPSLGRAPTSTPAPPRVPKL
STEKSRYDTSLNLTTKRFLDLLAQSPDGVVDLNWASQVLEVQKRRIYDITNVLEGIQLIS
KKSKNNIQWLGNRIDEASVSRYQDLQKEVSDFTQAEEKLDELITKCNLQLRLLTEDTQNK
KLGYVMCQDLRKSFDSPDQLVMVIRAPPETQMQVSEPSEGYQVSLKSTQGPIDVFLCPED
SSGVCSPVTGISPTKATDQTMPQDAEQPQCSTTQEITSTAASQQNSSPLPLCREAEAFLE
GDPFPNLGVLPDFDLSPLPSSDFLGGECFGNPLDGFINLSPPQSQDYHFGLEEHEGISEL
FDCDFGDLTPLEF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacgctcctatcaggtcagacgtcagaggatctattggtagactttgagtct
cttctgaatgctgggagtattggcctctcagaggaccaccaaatagtcatcatctccact
cccagcaatgtgggcttcaactctgcagtccccagcaacactggagagatccttctgttc
gccaccccccaaggccctgcagatgtggtccaggaccagcgacggccaactctgggacga
ccaccggtgaagaggaagctggacttggacagtgatcaccaatatgtgagcacctctcgc
cccccttctcttgggagagccccaacatccacaccagcacctcctagagttccaaagctt
tccacagagaagtctcgctatgacacgtctctgaacctgaccaccaagcgcttcttggac
ctgctagcccagtctcctgacggggtggtggacctcaactgggcctcgcaggtcctggaa
gtgcagaagaggcgcatctatgacatcaccaatgtcctggagggtatccagctcatctca
aagaaatcaaagaacaacatacaatggctggggaaccgtattgatgaagcgtctgtttcc
cgttaccaggacctacagaaagaggtctctgacttcacacaggcagaggagaaactggac
gagctcattaccaagtgtaaccttcagctgagactcctcactgaggatacccagaacaag
aagctgggttatgtgatgtgccaggatctgcggaagtcttttgactctcctgaccagctg
gtgatggtaatcagagcccctccagagacccagatgcaagtctcagagcccagtgagggc
tatcaggtctccctgaagagcactcagggtcccatcgacgtcttcctgtgtccagaggac
agttctggtgtctgcagcccagtgacaggcatcagcccaactaaagccacagaccagaca
atgccccaggatgcagaacaaccacagtgcagcaccacacaggaaattacatcaacagct
gcgtctcaacagaactcctcccctctgccattatgtcgtgaagcggaagcattcctggaa
ggcgacccgttccccaacctgggagtgctgccggactttgacctttcacccctgccgtcc
tctgacttcctcggtggggagtgctttgggaacccactggatggcttcatcaacctgtca
cctccacagagccaagactaccactttggtctagaggagcacgagggcatcagcgaactg
tttgactgtgactttggggacctgaccccactggagttctga
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