Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367905
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Entry
139367905 CDS
T10872
Name
(RefSeq) N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1
KO
K09657
beta-1,4-N-acetylgalactosaminyltransferase 4 [EC:
2.4.1.244
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00513
Various types of N-glycan biosynthesis
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
139367905
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139367905
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.244 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase
139367905
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
Wide specificity
139367905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
PA14
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
139367905
NCBI-ProteinID:
XP_070962384
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All DBs
Position
2:complement(39582589..40037684)
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AA seq
1302 aa
AA seq
DB search
MLRFPVKKIRKQFKLLLLLVLLTFAVWFTYLHINQGKAIKLHFNYGKDGERQLEGTDTSR
KRDARSSAGHHKTEDTSDSHEDDAREDESNAVGADPRDHGHIRKFLSQRHKKLPWKPEFK
GQANLHVFEDWCGSSVAQLRKNLHFPLYPHTRTTVKKLAVAPKWKNYGLRIFGFIHPYRD
GDFQFSVSSDDNSEFWVSPDESPLNARLLVYVGQLGTEWTAPGEFSKFRSQSSKSVHLIS
SRRYYFEILHKQDDKGSDHVEVGWRPFLPGLKYEVIDSAYISLYTDESSLKMNSVDHIPQ
TLASHSRPSSVEEQSQEHSHFSSQHGADMLKPDPRDTFYSTPMIQASRLENVLPACLYSP
TYVVKDFPIARYQGLQFVYLSFIYPNDFTRLTHMERENKCFYRESPIYLEKFGFYKYMKI
DEEDDDRPFFFPNPDDFPEEEEGVDPEDEAEIVGTQSPNRTAPPSLSAKRTSHPSLSIHT
SRPTLGEREGEEENSIVVRREKKKILKSDGQTDREWDKDGPRKRGGQTSRRGLLERPEAE
SEELHPQSDNMVHGRSLSWIRTGPSELGPGGPGRNGGGGGGAGEETPPKLSKSSLLFPQK
TSLSALASRAKQILSNSAPGNNAANARLHDNGARNHGNDKNAAAAAGNNNNREKKDENKI
YITRPRPVKEREREKEERRAERERGRGPGSRHPREVFPGVFLYQSGKTTRLVNLQSTRSR
GRGGAGSRRLVTAPQLWPKPRLRDGKAPPRGTNASVSRQGAVHQAASRVAVVRLRDRERR
RVRGGGREPHIPPEREAAADSTLPSKRGTPLPQHLQPPPPHSPTPPNSLENPQTIESRVE
SRLETRVTSYLKTSEITESQQKQPDPDQEPSESDPDPDPIRSNADPDPEPEEGGVSDYSY
ETEEARPGWAEESINWQRTFSVNPMDFELLRSDWNDLRCNVSGNLQLAESEVVDVLAQYM
EKLNERNGGIYTLLRIINVEKRRDSARGNRYLVELELMERGRNVVRLSEYIYLLLHRGRL
GGDSLENTEFIPASAPAGSPPGLILSTPAPPTSTHTPAQPGATPWGTAYANPLLCQPVML
QWRKDVMVHFVVPVKNQARWVQQFITDMEELHRQTKDDNFSIIIVDFESTDMDVEQALRE
STVPRYEYLRREGNFERSAGLQIGVDTIEDNHSIAFLCDLHIHFPLNILESIRKHCVEGR
LAFAPIVMRLGCGSSPLEPDGYWEVNGFGLFGIYKSDFDKIGGMNTEEFKDRWGGEDWEL
LDRVLQNGLEVERLRLRNFFHYYHSKRGMWNAQNKKIPKGGG
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcttccccgtgaagaaaattcggaagcagttcaaactccttctgctgcttgtg
ctgctcacctttgccgtgtggttcacctacctacacatcaatcagggcaaagctatcaaa
ctccacttcaactacggcaaagatggggagaggcagttggaggggacagacaccagccgc
aagagggacgctcgctcctcagccggccaccacaagacagaggacaccagcgacagtcac
gaggacgatgctcgggaggatgagtccaatgctgttggagctgaccccagagaccatggc
cacatcaggaagtttctcagccagcgccacaagaagttgccatggaaacctgagttcaaa
gggcaggccaacctccatgtgtttgaggactggtgtggctcgtctgtagcccagctccga
aagaacctgcactttcctctatatccccatacgagaactacggtgaagaagctggctgtg
gctccaaaatggaagaactacggcctccgaatatttggtttcattcatccatacagagat
ggtgatttccagttttcggtgtcgtcagatgataactctgagttctgggtgagtcctgac
gagagccctctaaatgccagactactggtctacgttggacagctgggcactgagtggact
gctccaggggagttcagcaagttcaggtcccagtcctcaaagtctgtgcaccttatctca
tccagacggtactactttgagatccttcacaagcaggatgacaaggggtcagaccatgtg
gaggttgggtggcgtccattcctgccaggtctgaagtatgaggtcatcgattctgcctac
atttccctctacacagatgaatccagtctgaagatgaacagtgtggaccacatccctcag
accctggccagtcacagtagaccatcatcagtagaggaacagtcacaagagcacagtcac
ttcagcagccagcacggagcagacatgctcaaaccagacccccgagacactttctatagc
acccctatgatccaggcatctcgtctggagaacgtgctgccagcctgtctctactcccct
acctacgtcgtcaaagacttccccatagccagataccagggcctacagtttgtgtacctg
tccttcatttatcccaatgactttacacgtctgacacacatggagagagagaacaagtgt
ttctacagggagtcgcccatctacttggagaagtttggcttctacaagtacatgaagata
gacgaggaggacgatgatagacccttcttcttccctaacccagacgatttcccggaagag
gaggaaggggtggacccggaagatgaggccgaaatcgtaggtacccaatcaccaaatagg
accgctccgcctagcctatcagctaagaggacctcccaccccagcctatccatccacact
tccagacccacccttggagaaagagagggggaggaggagaacagtattgtggtccgtaga
gagaaaaaaaaaattctcaagagtgatggacagacagacagagagtgggacaaggacggg
ccgaggaaaagagggggacagacctccaggaggggacttctagagagacccgaggcagag
agcgaggagctgcacccgcagtctgacaacatggtccacggtcgctccctctcctggatc
aggacgggtccctctgagctaggacccggggggccgggcaggaatggaggaggaggaggg
ggtgcaggagaggagacccctcccaaactgagcaagtcgtccctgctcttcccccagaag
acctctctctcggcccttgccagccgtgccaagcagatccttagtaactccgcccccggc
aacaacgccgccaacgcccgtctccatgataacggcgcccgtaaccatggtaatgacaaa
aatgctgccgccgccgccggcaacaacaacaatagggaaaagaaggatgaaaacaagatc
tacatcaccaggccgcggccagtcaaagaaagggagcgagagaaggaggagaggagggcg
gagagggagaggggcaggggtccggggtcgcgtcatccgagagaggtctttcctggggtg
tttctgtaccagagtggaaagaccaccagactggtcaacctccagagcactcgatccagg
gggagagggggagcggggagcaggaggctcgtcactgccccccaactctggcccaaaccc
cgactaagagacggcaaagctcccccacgtggcactaatgctagtgttagcagacaaggc
gcagttcaccaggctgccagcagggtggcggtagtgaggctccgagacagagagaggagg
agagttagaggagggggaagggagccccacatacccccagaaagagaggctgccgcagac
tccaccttacccagtaaaagaggcaccccattgccccagcacctccagcccccgccacct
cattcacccactccccccaactctttggagaatccccaaactatcgagagcagggttgaa
agcaggctagaaaccagggtcacctcatacctcaaaacctctgagatcactgagtcacag
caaaaacaacccgacccagaccaagaaccgtcagaatccgatccagaccctgatccaatc
cgctcgaacgctgacccagacccagaaccagaggagggtggggtgtccgactacagttac
gagactgaagaggcgcgtccaggctgggctgaggagagcatcaactggcagagaacgttt
tcagtcaaccccatggactttgagctgctgcgttccgactggaatgacctgcgctgcaac
gtgtctgggaacctgcagctggccgagagcgaggtggtggatgtgctggcacagtacatg
gagaagctcaacgagcgcaacggaggtatctacacccttttgcggatcatcaatgtggag
aagaggcgagactcagcccggggaaaccgctacctggtggaactggagctgatggagcga
ggtcggaacgtggtgcgcctctcggaatacatctaccttctcctccaccgtggccggttg
ggaggagacagcctggagaacacggagttcatccccgcctcggcccctgctgggtcccca
cctggtctcatcctcagcacccccgcacctccaacctccacacacacccctgcccagccc
ggggccaccccgtggggcacggcctacgccaaccccctgctgtgccagccggtcatgctg
cagtggcggaaggatgtgatggtgcattttgtggtgccagtgaagaaccaggctcgctgg
gtgcagcagttcatcacagacatggaggagctgcaccgtcagactaaggacgacaacttc
agcatcatcattgtcgacttcgagagcaccgacatggacgtggagcaggccctccgagag
agcactgtgcctaggtatgagtacttgagaagagaagggaactttgagcgctcagcggga
ctacagatcggagtggacactattgaggacaaccacagtatagcgttcctgtgtgacctt
cacatccacttccccctcaacatcctggagagcatcaggaagcactgtgtagagggacgt
ctggcctttgcccctatcgtcatgagactgggctgtggcagctccccgctagagcctgat
ggctactgggaggtgaatggctttgggctgtttgggatttataagtcggactttgataag
atcggagggatgaacacagaggagtttaaagaccgctggggaggagaggactgggaacta
ctggacagggtactacagaacgggctcgaggtggagagactgagactgaggaacttcttc
cactactaccactccaaaaggggcatgtggaatgctcagaacaagaaaatccctaaggga
gggggttag
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