Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368105
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Entry
139368105 CDS
T10872
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04140
Autophagy - animal
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139368105
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139368105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139368105
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139368105
Membrane trafficking [BR:
ocla04131
]
SNARE
SNARE associated proteins
Others
139368105
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
139368105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
139368105
NCBI-ProteinID:
XP_070962778
LinkDB
All DBs
Position
16:complement(18419381..18433451)
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AA seq
1065 aa
AA seq
DB search
MLATQTPDTGPEAKDVKQWIKEKLAWSLKALQKRYVTTDVVVTSEDGDANLLCCALEAIF
IHGIKSKYVRSEAGGRGRKGGSRGALPQPVFWSLLKTVTHGDVITELEKLSFVGTDTGRS
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPAAQAEALDLPFLTKRKESYDTVSQSSGGSDTVEVQRGG
PGVLGKGIGGVSGFKTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKEPWPCDL
EISNMENNGNAKRPLKDVLADFRESAHSSQDSMREDSYVSTPGADHLSENTAFSGSDSET
QGHVTHLTGPSNPASLGSDQEEPSTKTHAPSNVYSHIEGPSSLSDCVESTSTTPHLPVTE
TPQKKKTEYSVKSGSELSAHMNLHRTTSVLSRTVSTDSVTHSHSWISEDDIYKPHLEKLA
DPDESLLGSGPACVNGFTSPPLEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTV
GMWRDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDACVTSAEGRFDLAFPGKRLLMRA
ANCDEAEDWVDRITEAVNKCRPLHLLDDQWEVLQLSDSSVTPDEPPKSSPSSPSSVPASP
DRGGAVVEQEQQLELDWTRPTDSESDAIKEAVLYFCQDSEARNWTPLVFSLSLETLKGFR
MQDGQKVLRCSHPIEGIRDVVPDVSMGGPAFFRVVTARDTLKLRAKSSEEARAWRGLIRG
ALDSYLESGEDWEPESPGVAPGAGGNTHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQGFK
CAGCPKVIGVSRGKARLCEFSGQYYCDACHQGDTIVIPSRMVHNWDLAPREVSRHALKLL
AQIEHEPLLNLDLLNPDLWEHAEAMAQAQSLRQRLRLLGDYLLTCRSGACKNIQTRLGPR
TYLLESSHLYSVMDLRQIAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHTSDII
FPFQFDTTTRCKECKAVSHVTCKAKSPSCPRCLRLQRYLERDLQD
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacagggccagaggcaaaagacgtcaagcagtggatt
aaggagaagttggcgtggtcactcaaggcgttgcagaagcgctacgtgacaaccgatgtc
gtggttaccagcgaggatggtgacgccaatctgctgtgctgcgcactggaggccatcttt
atccacggcatcaaaagcaaatatgttcgctccgaggctgggggacgcggcaggaaaggg
gggtcccggggagccctcccccagcctgtgttctggagcctcctcaagactgtcactcac
ggtgacgtgatcacggagctggagaagctgagcttcgtgggtacggacacgggtcgcagc
cgggcctggttgcggctggccctcaaccacggcctaatggagtgctacctggcctccctg
ttccgcgagggctccaaactgcaggcccactaccagccctccgccctgcttctggaccct
gaggagcgtgaggtgctgctcagttacatccagggcctggcctccctcaccttcaacctc
tcttacaaatcggccgtgctcaacgagtggaccaccacccctctggctctggctggcctc
tgccctgccgcccaggctgaagcgctcgacctcccctttctcaccaagcgcaaggaatcc
tatgatacggtgtcacagtcgtccggcgggtcggatacggttgaagtgcagcgagggggg
ccaggggtgctggggaaggggattgggggggtctcagggtttaagaccccactgaattcg
tccaatttgagcctggacaccacagggtcgtctcagctctcctccagtctgagctctgac
agtctgcttcaaggtcacgaccccaagagcccagacaaggagccctggccatgtgacctg
gaaatctccaacatggagaacaatggcaatgccaagaggcctctcaaagatgttctggca
gacttcagggagagtgcccattccagtcaggactccatgcgcgaggattcgtacgtgtcc
accccaggcgcagaccacctctctgagaacactgccttcagtggctccgacagcgagacc
cagggacatgtcacacatctcactggcccctctaaccctgcttcactggggtcagaccag
gaggagccgtccaccaagacccacgccccctccaacgtgtactcgcacattgaagggccc
tccagtctcagtgactgtgtggagagcacatcgacaactcctcacctgcctgtcactgag
acgccacagaagaaaaaaacagaatattctgttaagagcggctcggagctttcagcccac
atgaacctacaccgcactaccagcgtgctcagtcggacggtgtctacagactcagtcaca
cattcccactcctggatctctgaggatgacatctataagccacaccttgagaaactggct
gaccccgatgagtctttgctagggtctggcccagcttgtgtgaatggatttacctctccc
cctctagagcccgagaccccccagtccccccccagcgtggtccaccgcaggcagataggc
ctctccaaccctttccgcggactactgaagctgggacacctggagcggcggggcacggta
ggcatgtggcgcgactactactgcgagctctcgcccttcgagttccgcctctacctgaat
gcagaggagcgcacctgctgcgacaattgctccctgctgcgttgcgaggatgcctgcgtc
acctcggccgagggccgcttcgaccttgccttccccgggaaaaggctccttatgcgggcg
gccaactgcgatgaggccgaggactgggtggaccgcatcactgaagccgtcaacaagtgc
cgcccgcttcacctcctcgatgaccagtgggaggtgctgcagctctctgacagcagtgta
accccggatgagcccccaaaatcttccccttcatccccctcctccgtacccgccagtccc
gatcgagggggggctgtggttgagcaggagcagcagctggagctggactggacgcgtccc
acagactcagagtcagacgccattaaggaagcagtgctgtacttctgccaggactccgag
gctcgcaactggactcctctcgtcttctccctctccttagagactctcaagggcttccgg
atgcaagacgggcagaaggtgctgcgctgctcccaccccatcgaggggatccgggacgtg
gtcccagacgtttctatgggcggaccagccttctttagggtcgtaacggccagggatacg
ctcaagctgagggccaagagctctgaggaggcacgtgcctggaggggcctcatcagggga
gccctggactcctacctggagagtggagaagactgggagcctgagagccccggggtggcc
cctggggcgggagggaacacccacagactggtgcagcatagactgaagggggacggggtg
ctgctggcccatctatgcacagtgcccacagagaaggggctggaccttcagggcttcaag
tgtgcaggttgtccaaaggtgataggcgtctcccgagggaaagccagactgtgtgagttt
tcagggcagtactactgcgacgcttgtcaccagggcgacaccatcgtcataccctcccgc
atggtgcacaactgggacctcgcacctcgggaggtctccaggcatgcccttaagctgctg
gctcagattgaacatgagcccctgctcaaccttgaccttttgaaccctgacctgtgggag
catgccgaggccatggcccaggcacagagcctcagacagaggctgcgtctcctaggagac
tacctgctcacctgccgcagcggagcatgcaagaacatccagaccagactgggtccaagg
acatacttattagaatcaagccatctctacagtgtcatggacttacgacagatagcggag
ggaatgtatgtggcctacctgaacactttgatccagtttgcctccaaccacgtccaccac
tgtgacctttgcacccagaggggcttcatctgccagatctgtcacaccagtgacatcatc
ttccccttccagtttgacaccaccaccaggtgtaaagagtgtaaggccgtgtctcacgta
acctgcaaggccaagtcgccttcctgtccacgatgcctgcgtcttcagaggtacctcgag
agagatctgcaggactaa
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integrated database retrieval system
