KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368206
Entry
139368206         CDS       T10872                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03440  Homologous recombination
ocla03460  Fanconi anemia pathway
ocla04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139368206
  09124 Replication and repair
   03440 Homologous recombination
    139368206
   03460 Fanconi anemia pathway
    139368206
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocla01009]
    139368206
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139368206
   03036 Chromosome and associated proteins [BR:ocla03036]
    139368206
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139368206
Enzymes [BR:ocla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139368206
Protein phosphatases and associated proteins [BR:ocla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     139368206
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139368206
  Multi subunit type E3
   BRCC complex
    139368206
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     139368206
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     139368206
    BRCA1-A complex
     139368206
    BRCA1-B complex
     139368206
    BRCA1-C complex
     139368206
    BRCA complex
     139368206
   FA (Fanconi anemia) pathway
    Downstream FA components
     139368206
SSDB
Motif
Pfam: BRCT BRCT_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 RING_XB3-XBAT31 zf-Nse zf-RING_5 PTCB-BRCT zf-ANAPC11 zf-MIZ RTT107_BRCT_5 U-box zf-RING_4 YafT TRAF3_RING zf-rbx1 zf-RING_10 YicC-like_C
Other DBs
NCBI-GeneID: 139368206
NCBI-ProteinID: XP_070962954
LinkDB
Position
16:complement(22553590..22596988)
AA seq 1562 aa
MNTVMSPKAEDVRQGISVICEILQCPICLELMSTPVSTKCDHQFCKFCIMKLLDSSRRKE
ANCPVCKTKITKRSLQESPGFQKLAEGLQNMVQAYEHDTCTNYFTGMSQVRRHMSVTETV
QKKNGHDVSSDVVWASDRADDEDHEFSMSCSSTIAAKDGFATLMGLEDSCPVISDEGFDS
SLDDIPPATEKHTDDSNATSTTEKQKPALEAEIPEVVERAPSRPQKLGKKITTHPQDPPC
CPEKVRNQPVRRSTRNNKRESLPEMIDQNQKKSLEKVSEWLMNNSSTEVNSEKEKNTEGS
YDSVSLAGSCSPSSPLEDNLRNKDQSPKREERGKCLEELVFGAVYKRDRRGNRSFSPQNI
AITDPPPPCPAEELQILKKIAKRRMRNKLTPADFVKRPRSEENEDSVMDDQPEMTEPQED
SPNEHPKDTEEDKLIDLTGELNSNSSDKQGEELDELPEGDNKENEDVEDSPVFDVPLREP
GRKSNKKMHGRWQDVDGDLQGKVKSENNEQKKPAKKKGENIKVEKSKATKSLVLVGVREG
GSDSKMPKSRPSGQTEVQIESYPSSEDPGSPIMRRTRRSRRLQLFTEEVQGSNKIGTATS
TKVVVLDSDCNEMQQSKEAKADTDRDNVACLQNQNTEKAVRKNGCVLDEEMGGIESLDSS
EKRLCEMIESQKVNQVEESIVEVPSTGSPCHADVACSVTMVPSSISTPEASVSCAVPESV
NQSNPVIKPLDDLRSNVPQETSASQAKCIDLDEDVRNDSELDTEQLLKSFKATKRKSFHL
GSPNIKRSSFWSNKEITTLTKTQENKHVGTDMEAGNGQGFSRTTECPTVQQESEKGTIFE
NSCCSDLSPPSSSLNNISQEKAQRNRKRLRKSILTRPPQDLVDSSNPDTSGKTQKQILAR
LSGNSSKSALSPNKVTKSQMESPHQAVGSGLLFPAFGASKEDLPDPTPVASKQLRVPKSQ
QLYNVEGSMRKSPTELESSHSVGSETAVELNKTCPENMTGNMANTESSLTPDGLLPIIQS
VVIQEAQRTKRCGVVSLHSPIKSTLKRRKAQRLESSSESNCSGEEEELPSLAQIFRPSTC
PPTAEEEEEESVTLLKDHAREQGSYREAGDAAEDGQRASSPPMCPSPEWVTTSQASVDLF
GTPEEAEGMAGDTGLTQESSQFSSECIATQQKVAMQEELRRLERMMALVSEALQEKEEEE
PTGAKVYPGAPYPPALLQPDRSTVSLGLDLQATLPCGQGTRKRSANREGAQNIGGNAASP
PPGLGDCEGLGPTPTTPCRTKHEGPGGTGERLGRQSGRSLRSSMRARPNQVSPVVRVHSG
TNAPSAGLEVQDTPVVIQPANTHPSTHTPLREPAGVKLVLVASGLSAPEQSMVKKFAKRM
GGSVCSQVTSETTHVIMNTDGDLVCERTLKYFLGIAGRKWVVSFQWISECFKQGTVLNET
SFEVRGDVVNGHDHQGPMRARTTGDTSLLMKDYEICFQGPFTDMTTGQMEWMVELCGATV
VQKPLLFTGELKTRQLIVVQPGSDQSPINYQALQRIATVITRGWVFDSVATYTLQSLDNY
RT
NT seq 4689 nt   +upstreamnt  +downstreamnt
atgaacaccgtgatgtccccgaaggctgaagatgtcagacaggggatctctgtcatctgt
gagatcttgcagtgtccaatatgtttggaattgatgagcacacctgtgtctactaagtgt
gaccaccagttttgcaagttttgtataatgaagcttttggacagcagtaggagaaaggag
gccaactgtccagtttgtaagacaaagatcacaaaaaggagtttgcaggagagccctggg
ttccagaaattggccgagggattgcagaatatggtccaggcctatgaacatgacacctgc
acaaactacttcactggaatgtcccaggtgaggagacatatgagtgtcacagagactgtg
cagaagaaaaacggccatgatgtctcatctgatgtcgtatgggctagtgaccgtgctgat
gacgaggatcatgagttttcaatgtcctgctcgtcaactatagcagccaaggatggcttt
gcaacgctcatgggtcttgaagattcttgccctgtcatttcggacgaggggtttgacagc
agcctagatgacatacctccagccactgaaaagcataccgatgactctaacgctacctcc
accacagaaaaacagaagccagcattagaggcagaaatacctgaggttgttgaaagagct
ccttcacgacctcaaaagcttggaaaaaagataaccactcatcctcaagatccaccatgc
tgtcctgaaaaggtcagaaaccaacctgtcagacgatccacgaggaataacaaaagagag
tcattgcccgaaatgattgaccagaatcagaagaaaagtctagagaaagtctctgagtgg
ctcatgaataattcctcaacagaagtaaactctgagaaggagaaaaacacagagggctct
tatgactcagtttctttggcaggaagttgttccccctcctcacccttagaggataacctc
agaaataaggaccagagtccaaagagagaagagcgtggcaaatgtcttgaggagctggta
tttggggctgtttacaaacgggatcgaagagggaaccgcagtttttcaccacagaatata
gcgatcacagaccctccaccaccctgtccagctgaggaactccagatcctgaagaagatt
gccaaaaggaggatgagaaataaactgacacctgctgactttgtcaagagaccaagatct
gaggagaatgaagacagtgttatggatgaccaaccagagatgacagaaccacaagaggat
tctcccaatgaacacccaaaagatactgaagaagataagttgattgacctgactggggag
ctgaattctaatagctctgacaagcaaggagaagagcttgatgagttgccggaaggtgac
aacaaagagaatgaagatgtagaggacagtcctgtgtttgatgtgccactacgggaacct
gggaggaagtcaaataaaaagatgcacggtaggtggcaggacgttgacggggatttacaa
gggaaagtaaagtcggagaataacgagcaaaaaaagcctgccaagaaaaaaggggaaaac
atcaaggtggagaagagcaaggcaaccaaatccttagtccttgtgggtgtcagagagggt
ggaagtgactctaagatgcctaagagcagaccgtcaggccagaccgaggttcagattgag
agttaccctagcagtgaggatccaggaagcccaatcatgaggagaaccaggaggagtcgg
aggcttcaactcttcacagaggaagtacaagggagtaacaagatcggcactgcaacatcc
acaaaggttgtcgttcttgattcagactgcaacgagatgcagcaatcaaaggaggcgaaa
gctgacaccgacagggataatgtggcgtgtttgcagaaccaaaatacagaaaaggctgtc
aggaaaaacggatgtgttttagatgaagaaatgggaggtattgagagcttggactctagc
gagaaaagattgtgtgaaatgattgagtcacagaaagtgaaccaagttgaggagtctatt
gtcgaagtcccaagtacaggaagtccttgtcacgctgatgttgcttgttcagtgactatg
gtaccaagttcaattagtacccctgaggcaagtgtctcatgtgccgtgcctgagagtgta
aaccaaagtaatccggttatcaaaccattagatgacttgagatcaaatgtaccacaagag
acgtcagccagccaggccaaatgcattgatctggatgaggatgtccggaatgacagtgag
ctggacactgagcaactgctgaagagcttcaaagccaccaaaaggaagtccttccacctt
ggtagtccaaatatcaagaggagttccttctggtccaacaaggagattacaactcttaca
aagactcaagagaacaaacatgttggcacagatatggaagcaggaaatgggcagggattt
tcaaggacaacggagtgtcccacagtccaacaggaatctgagaaagggacaatattcgaa
aattcttgctgtagtgatttgagcccaccttcaagttccctcaacaatatttcacaagaa
aaggcgcagaggaatcgtaaaaggctcagaaaatccattcttaccagaccacctcaggat
ttagtggattcttcgaaccctgataccagtgggaagacccagaaacagattctggccagg
ctttctggcaacagctcaaaaagtgccctcagtcccaacaaagtcacaaaaagccaaatg
gaatctccccaccaagctgtgggttctggtctgctctttccagcttttggcgcctctaag
gaagatctaccagatccgacacctgtagcttcaaagcaacttagagtccctaaaagtcag
cagctatacaacgtggagggcagcatgaggaaaagtccaacagaactggagagtagccac
agtgttggatcagagacggcagtggagttaaacaaaacatgtccagagaacatgactgga
aacatggccaatacagagtcctccttgactccagatggcctccttccaattatccaatca
gtagttatccaagaggcgcagaggacgaaaagatgtggtgtggtcagcttgcactctccc
atcaagagcaccctaaagcggaggaaggctcagagactggagtcttcctcggagtccaac
tgcagtggggaggaagaggaactgccttcccttgcgcaaattttcagaccttcgacttgt
ccaccaaccgctgaggaggaggaggaggaatcagtcacattgctcaaagaccatgccagg
gaacaaggaagctacagggaggctggtgatgcagctgaagatgggcagcgagcgagcagt
cctcccatgtgccccagtcccgaatgggtcaccaccagccaggcatctgtggatctgttt
ggaacaccagaagaagctgaaggaatggcaggtgacactggcctgacacaggaatcatca
caattttcaagcgagtgtattgccactcagcaaaaggttgcgatgcaggaggagctgcgg
aggctggagagaatgatggcgttggtgtctgaagcgctccaggagaaggaggaggaggaa
cccactggggccaaagtctaccccggggccccatatcccccagcgctgcttcaaccagac
aggtccacagtctccttaggccttgatctccaggcgaccctgccgtgtggccagggcacc
aggaagagatctgccaacagggaaggtgcccaaaacattgggggaaatgcagcctcaccg
ccccctggtcttggagactgtgagggccttgggcccacccccaccacgccctgccgcacc
aaacatgagggacctggagggactggggagcggcttggcagacagtcaggacggagccta
aggagcagcatgagagcgaggcccaaccaggtgtcgccagtggtcagagtgcacagcggg
accaatgctccctcagctgggctggaggtccaggataccccggtggtcatccagcctgca
aacacacacccatcaacacacactccactgcgggaacccgctggggtcaagttggtgctg
gtagcatcaggactcagtgcacctgaacagtcgatggtgaaaaagtttgccaagaggatg
ggaggcagtgtgtgttcacaagtgacgtccgagaccacccatgtcatcatgaacacagat
ggtgatctggtgtgtgagcgcacgctcaagtacttcctgggcatcgcaggcaggaagtgg
gtggtgagcttccagtggatttccgagtgtttcaaacaagggacagtcttaaatgagacg
tcatttgaggtgcgaggagacgttgtgaacggacatgatcaccaagggccgatgagagca
cggaccacaggggacacaagtctgctgatgaaggattacgagatctgtttccaaggccct
ttcaccgatatgaccactggtcagatggagtggatggtggagctttgcggcgcaacagtg
gttcaaaagcctcttctcttcactggtgaattgaaaactcgtcagctaatagtggtacaa
ccaggctcggaccaatcaccaataaactaccaagccctccagaggatagccacggtcatc
acccgtggttgggtatttgattccgtggcaacctacacccttcaaagcctcgacaactac
agaacgtaa

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