KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368809
Entry
139368809         CDS       T10872                                 
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ocla03037]
    139368809
Cilium and associated proteins [BR:ocla03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   139368809
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122_C Beta-prop_EML_2 Zn_ribbon_IFT122 WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 TPR_GEMI5 Beta-prop_EML Beta-prop_WDR90_POC16_2nd TPR_IF140-IFT172 TPR_IFT80_172 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_Vps41 eIF2A WD40_MABP1-WDR62_1st TPR_7 Beta-prop_WDR75_1st TPR_COPA_B TPR_2 Beta-prop_IFT140_2nd Beta-prop_SPT8 TTC7_N TPR_12
Other DBs
NCBI-GeneID: 139368809
NCBI-ProteinID: XP_070964279
LinkDB
Position
16:57926289..57962063
AA seq 1196 aa
MRAVPTWIDKVHDRDKVQQCIYDLAFKPDGSQLIVAAGNRVLVYDTSDGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVSHQLASCSSG
DFGLWSPEQKSVSKHKVNSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGG
SSSPIWSIAWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGKDRTLTYDPCCVSYFSKGE
YIVMGGSDKQASLYTKDGVRLGTIGEQSSWVWTCRVKPDSNYVVLGCQDGTIAFFQLIFS
TVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRNRLAIQLPEKILIYE
LYSDDSSDMHYRIKEKICRKFECNLLVVCSQHIILCQEKRLQCLSFTSIKEKEWLMESLI
RYIKVIGGPPGREGLLVGLKNGAILKIFVDNPFAITLLKQSTSVRCLDMSTSRSKLAVVD
EHNTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGSGYLNIKASNFPVHQQKLQGF
VVGYNGSKIFCLHVYSMSAVEVPQSAPMYQYLERRMFKEAYQIACLGVTDSDWRDLATEA
LEGLDFDTSKKAFIRVRDLRYLELINSIEERKKRGESDTELFLADVYAYQGKFHEAARLY
KRTGLDSRALSMYTDLRMFEYAKEFVGAADPKNTRMLMSKQADWAKNSKEPRAAAQMYLT
AGEHLKAIDIIGEHGWVDMLIDIARKLDKAEREPLAKCAAYFQKLKHHGYASETYSKMGD
LQALVHLHVEARHWDEAFALVEKHAQFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQSE
AVKVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIARENEERKEEMLKKFKRFQHLAELY
HVYHSIQRYTVRCSPQLKDEPFSSHMPETLFNISRYLLHNLTKDVPLGISKVNTLYALAK
QSRTLGAFKLARHAYEKLQELHVPSRFQESMDLGSLTVRSKPYHDNEDLIPMCYRCSTNN
PLLNSQGSVCINCKQPFIYSASSYEVLPLVQFYLDKGIGDEEAVSLIDLEVPCIDRKAAR
WQEMSSGESQSLKLDDGTEDTEEDPFMAKLSFEQGGSDFVPVVVSRSVLRSMSRRDVLIK
RWPKPLQWEYYRSLLPDVSITMCPSCFQMFHSEDYELLVLQHNCCPYCRRPIDEPN
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgagggcagttcctacatggattgacaaagtacatgatcgcgacaaagttcagcaatgt
atctacgaccttgccttcaaaccagatggcagccagcttattgtggcagctgggaatcgt
gttttggtgtatgacacatcagatggaactctcattcagcctctgaaaggacacaaggac
acagtgtactgtgttgcctacgccaaagatgggaaacggtttgcctcaggttctgctgac
aaaagcatcatcatctggacatctaaactggagggtattttgaaatatacacataatgac
tccatccagtgtgttgcctacaacccagtcagccaccagctggcctcttgctcctctggg
gactttggtctgtggtccccagaacagaaatctgtatccaagcacaaagtcaacagcaag
ataacatgttgtgggtggaccaacgacggtcagtacctggccctgggcatgatgaacggg
gtggtgagcatcaggaataagaacggagaggagaaggtgaaaatagagcgaccaggagga
tcctcctctcctatctggtccatcgcatggaacccctccaaggatgagcacaatgacatc
ctggctgtggcagactgggggcagaagctatccttctaccagctcagtggaaaacagatt
gggaaggacagaactctgacctatgacccctgctgtgtcagctacttctccaagggggag
tacattgtgatgggtggctcggacaagcaggcctccctctacaccaaagatggggtgcgg
ctcggcaccatcggggagcagagctcctgggtgtggacctgtagagtcaaacctgactcc
aactatgtggtgttgggctgccaggatgggaccatagccttcttccagctcatcttcagc
acggtgcacggcctgtacaaggaccgctatgcctacagagacagcatgaccgatgtcatc
gtccagcacctcatcactgaacagaaagtgaggatcaagtgcagagagcttgtgaagaag
atagctatctacaggaaccgcctggccatccagctgcctgagaagatcctcatctacgag
ctgtactctgacgactcctcagacatgcactaccgcatcaaggagaagatctgcagaaag
tttgagtgcaacctgctcgtggtctgctcccagcacatcatcctgtgtcaggagaagagg
ctgcagtgtctgtccttcaccagtatcaaggagaaggagtggcttatggagtctctgatt
cgctacatcaaagtgattggtggcccaccgggcagagagggcctactggtggggctgaag
aatggagctatcctaaagatctttgttgacaacccatttgccatcacactgctgaagcag
tctacgtctgtgcgttgtctggacatgagtacatcccgcagcaagctggctgtggtggac
gaacacaacacctgcctggtttacgacatccacaccaaggagctgctcttccaggagccc
aatgctaacagcgtagcctggaacacccagtgtgaggacatgctgtgtttctcaggcagt
ggctacctcaacatcaaggccagtaacttcccagtgcatcagcagaagctgcagggcttc
gtggtgggctacaacggctccaagatcttctgcctgcacgtgtactccatgtctgccgtg
gaggtgcctcagtcggctcccatgtaccagtatctggagaggaggatgttcaaggaggcc
tatcagatcgcctgcctgggtgtgactgacagtgactggagggatctggccacggaagca
ctggaggggctcgactttgacacctctaagaaggcattcatcagagtacgagacctgcgc
tacctggagctcatcaacagcattgaggagaggaagaagagaggtgagagcgacactgag
ctgttccttgcggatgtctatgcctaccaggggaaattccacgaggctgccaggctctac
aagaggactggcttggactccagagctctcagcatgtacacggacctgcgcatgtttgag
tacgctaaggagtttgtgggcgcggcagaccctaaaaacactcgcatgctgatgtccaag
caggccgactgggctaagaacagcaaggagccgcgggccgctgctcagatgtacctgact
gcaggagaacacctcaaagccatcgacatcataggagaacacggctgggtcgacatgctg
attgacatagcccgtaagttggataaggcggagcgcgaaccactggctaagtgtgcggcc
tacttccagaagctgaagcaccatggttatgcctctgagacctactccaagatgggagac
ctgcaggccctggtgcatctgcacgtggaggcacgacactgggatgaggccttcgctctg
gtggagaaacatgcccagtttaaagatgacgtctatgtgccctacgctcagtggctggct
gagaacgaccgctttgaggaggcacagaaagctttccacaaggcgggccgacagagcgag
gctgtgaaggtgttagaacagcttacccacaatgccgtggtggagagcaggttcaatgac
gcagcatattattactggatgctctctatgcagtgtctggacatcgctagggaaaacgag
gagaggaaggaggagatgctgaagaagttcaagcgtttccagcacctggctgagctctac
catgtttaccactcaatacagcgttacacagtaagatgctcaccacagctgaaggatgaa
ccctttagctcccatatgcctgagacgctctttaacatctccaggtacctcctacacaac
ctcaccaaggacgtgccactgggcatctccaaagttaacactctttatgcgttggccaag
cagagcagaaccctgggagcgtttaaactagccagacatgcctatgagaagctccaggaa
ctccacgttccctctcgcttccaggagtcaatggatctgggcagccttaccgtccgctcc
aaaccataccacgacaatgaggacctgatccccatgtgttaccgctgctccaccaacaac
cccctgctgaacagccagggcagtgtgtgtatcaactgcaaacagcccttcatctattca
gcatcttcatacgaggtccttcctctggtgcagttctacctggacaagggtatcggtgat
gaggaggctgtgtctctcattgacctggaagtcccttgcattgacaggaaggctgctcgc
tggcaggagatgagcagtggggagtcccagtctctgaagctggatgatggcacagaagac
acagaggaggaccccttcatggccaaactcagctttgagcaggggggctctgactttgtc
ccggtggtggtgagtcgctccgtgctgaggtctatgagcaggagggatgtcctgattaag
cgctggcccaaacccctgcagtgggagtactaccgttccttactgcctgatgtcagcatc
accatgtgcccctcctgcttccagatgttccacagtgaagactatgagctgcttgtgctt
cagcacaactgctgtccctactgccgtcggcccatcgatgaacccaactga

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