Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369015
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Entry
139369015 CDS
T10872
Name
(RefSeq) NF-kappa-B essential modulator
KO
K07210
inhibitor of nuclear factor kappa-B kinase subunit gamma
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04210
Apoptosis
ocla04620
Toll-like receptor signaling pathway
ocla04621
NOD-like receptor signaling pathway
ocla04622
RIG-I-like receptor signaling pathway
ocla04623
Cytosolic DNA-sensing pathway
ocla04625
C-type lectin receptor signaling pathway
ocla04920
Adipocytokine signaling pathway
ocla05132
Salmonella infection
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139369015
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139369015
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139369015
04621 NOD-like receptor signaling pathway
139369015
04622 RIG-I-like receptor signaling pathway
139369015
04623 Cytosolic DNA-sensing pathway
139369015
04625 C-type lectin receptor signaling pathway
139369015
09152 Endocrine system
04920 Adipocytokine signaling pathway
139369015
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139369015
09171 Infectious disease: bacterial
05132 Salmonella infection
139369015
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139369015
Protein kinases [BR:
ocla01001
]
Serine/threonine kinases: Other
IKK family [OT]
139369015
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NEMO
CC2-LZ
zf_C2H2_10
BLOC1_2
Prefoldin
Motif
Other DBs
NCBI-GeneID:
139369015
NCBI-ProteinID:
XP_070964688
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Position
16:complement(75216358..75253891)
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AA seq
546 aa
AA seq
DB search
MVQPQADMALQWEMAGEEGNVALQVPAELAANEVVTRLLGDNQQLREALQRSNQALRQRC
EEMEEWQRRSREEREFLSCRFQEARALVERLAMENHSLTSLASPSSPPNPGANQGLLVNG
PIHGSETNGPMASSLPVGGGNDFLQLLKSHKEEFEEGMRDLRRRNEELEKEREEGERERD
YLHRSVEQLRTKLSCGVTEETVQRSDAPPSSDSSHLAKLTEQLQATQGRYKELQEQLDSL
QKSSAQRDRTEVLLKQKDKDCTQLDKDVEALKAQVTSLLGELRERQSCLDRSQQDRNILD
DRLSSTRESLAASEREMEQQRKQHSVTVDKLLLQTHNLETALKTDRLVITEERRKLAQLQ
HAYTCLFKDYDTKLKTEGGDMVVRLEEAERALALKQDLIDKLKEEVEQQRGSLETVPVLT
AQAEIYKADFLAEREAREKLNQRKEELQDQLNTALAEMERLKQEETSRARMEKMQQRHLE
VFRPPRPHITPQSGSAFNSTARSVGLAAEGVAGGGAEELPDYRCPKCQYQAPDMDTLQIH
VMDCIQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagccccaggcagacatggccctgcagtgggagatggcaggggaagagggtaac
gtggctcttcaggttcctgctgagctggcagccaatgaggtggtgactagactactggga
gacaaccagcagctccgagaggcgctgcaacgcagcaaccaggccctgcgtcagcgctgt
gaggagatggaggaatggcagcggaggtctagagaagagagagagttcctcagctgtcgt
ttccaggaggcccgggcgctagtggagagactggccatggagaaccatagcctcaccagc
ctggccagcccctctagcccccccaaccctggagcgaaccaaggcctgctggtcaacggc
cccatccatggctcggagaccaacggacctatggcatcctctctgcctgtaggaggaggg
aacgactttctccagctgctgaagagccacaaagaggagtttgaagaagggatgagagat
ctgaggaggaggaatgaagagctggagaaagagagggaggagggagagagagagagagac
taccttcatcgctcggttgagcagctccgaaccaaactgagttgtggtgttactgaggaa
acggttcagcgttctgatgccccgccctcctctgacagctcccacctggccaaactcaca
gagcagcttcaagccacacagggcaggtacaaagagctgcaggagcagttggattccctc
cagaagagttcagctcagagagacagaactgaagtgctgcttaaacagaaggacaaagac
tgtacccagctggataaggatgtcgaggcgctgaaggcccaggtgacgtctctcctggga
gagctgagagagagacagagctgtttggaccggagccagcaggaccgcaacatcctggac
gacaggctgagcagtactcgggagtcattggcagcatcagagagagagatggaacaacag
aggaagcagcactctgtgacggtagacaaactactgctgcagacacacaacctagagacc
gcactgaagactgaccgcctggttattactgaggagaggaggaagcttgcccagctgcag
cacgcctacacctgtctgtttaaggactacgacaccaaactcaagactgagggaggagac
atggttgttcgtctggaggaggcagagagagctttggctctgaaacaggatctgattgac
aagctgaaggaagaggtggagcaacagagaggatctctagagactgttcctgttctgact
gcccaggctgagatctacaaggcagacttcctagcggagcgggaggccagagagaagttg
aaccagaggaaggaggagcttcaggaccagctgaacacagcgttggctgagatggagcgt
ctgaaacaggaggagacctcacgggctcggatggagaagatgcagcagagacacctggag
gtcttcagaccaccacgaccccacatcaccccccaatcagggagtgcctttaactccacc
gcccgcagcgtgggattggctgcagagggagtggctggaggcggggctgaagagcttcct
gactaccgctgtccaaagtgccagtaccaagcccccgacatggacacactgcagatacat
gtcatggactgtatccagtaa
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