Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370543
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Entry
139370543 CDS
T10872
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139370543
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139370543
Peptidases and inhibitors [BR:
ocla01002
]
Aspartic peptidases
Family A22: presenilin family
139370543
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GFIT
Motif
Pfam:
Presenilin
DUF6541
Oxidored_q3
Motif
Other DBs
NCBI-GeneID:
139370543
NCBI-ProteinID:
XP_070966205
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Position
17:complement(22577617..22593226)
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AA seq
450 aa
AA seq
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MSTSDSEEDSYNERTALVASEIPSVPSYQQDPDQPQPADMEPRRRTVAPEPAAEPPSLDR
SAVEREPVDLEEEEELPLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTEKNGQQLIYT
PFTEDTDTVGERLLNSVLNTIIMISVIVVMTIFLVVLYKYRCYKFIHGWLILSSLMMLFW
FSFMYLGEVFKTYNLAMDYPTVAMIIWNFGVVGMICIHWKGPLQLQQAYLIAISALMALV
FIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMIWMV
GMANPARHAEPTNQDTGSSDEEAHRSEGSALARDWVEPETQVSSGMNRSYSTEDDLDEED
RGVKLGLGDFIFYSVLVGKAAATGGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPI
SITFGLVFYFSTDNLVRPFMDNLAAHQFYI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctcggacagtgaagaggactcctacaatgagaggacagctctggttgcatcc
gagataccttctgtgccatcttaccaacaagaccctgaccaaccccagcctgcagacatg
gagcccaggcgccgcacagtggccccagagcctgcagctgaaccccccagcctggacagg
agtgccgtggagcgggagcccgtagacctggaggaagaggaggagctccccctcaagtac
ggcgccaagcatgtcatcatgctgttcgtccccgtcaccctttgcatggtggtcgtcgta
gccaccatcaagtcggtcagcttctacactgagaagaacggacagcagctgatctatacg
ccgttcacagaggacacagacacagtgggcgagcggctgctcaactcagtgctcaacacc
atcatcatgatcagcgtcatcgtggtcatgaccatcttcttggttgtgctctacaagtac
cgctgctacaagttcattcacggatggctcatcctgtcctcgctgatgatgctcttctgg
ttcagcttcatgtacctgggggaggtatttaaaacctacaacttggccatggattaccca
acagtagccatgatcatctggaactttggggtggtaggaatgatctgtatacactggaag
gggcctctgcagctgcagcaggcctacctcatcgccatctcggccctcatggccctggtg
ttcatcaagtacctgcccgagtggtccgcctgggtcatcctgggagccatctccgtctac
gatttggttgcggtcttgtgccctaaaggtcctctcaggatgcttgtagagaccgcacag
gagcgtaacgagcccatcttccctgctctcatatattcatctgccatgatatggatggtt
gggatggccaacccagcaagacatgcagagcccacaaatcaagatacaggttcctcagat
gaggaggcacatcggagtgagggcagcgccctggcgagggactgggtggagccagagact
caagtgtcctcagggatgaacaggtcctactcaaccgaggacgacctagacgaggaagac
cgaggagtcaagctgggactgggggacttcatcttctacagtgtgctggtggggaaggct
gccgccaccggaggagactggaacaccacgctggcctgctttgtggccattctcatagga
ctctgcctcactcttctgctgctggccatattcaagaaggccctcccagctctccctatc
tccatcaccttcggcctggtcttctacttctctacagacaacctggtccgcccctttatg
gacaacctcgctgctcaccagttctacatctga
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