Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370657
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Entry
139370657 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
ocla04144
Endocytosis
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139370657
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139370657
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139370657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139370657
04121 Ubiquitin system [BR:
ocla04121
]
139370657
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139370657
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139370657
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
HECT type E3
139370657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
139370657
NCBI-ProteinID:
XP_070966364
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All DBs
Position
17:27084611..27143574
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AA seq
870 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKKTEKCNNTHNPKWKQSLTVILTP
FSKLIFRVWSHQTLKADILLGMATLEISETLKSNDMKLSEVVHTLQLCSDRDHTDVVGDL
SVCLDGMQVDPETFTSAERDHVAVPNGEVRQNRDSVNSDNIPPRSSRDTSPSSDSTEDWV
IVPNGHTVNSMGSPAPSPGGSKSTRPPRPARPPPPTPRRPAASPASSSSSTHSEVSEPPA
SYGSSLASASGASSNPPQENGAAPTQAASAPPAIGAPAGAPPTGGPPRVIPNGPLPPGWE
QRVDQNGRMYFVDHIEKRTTWDRPDSLPSGWERRVDPMGRVYFVDHITRTTTWQRPTQES
VRNYEEWQHQRSQLQGAMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGR
VYFVHHTTRMTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGK
SSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQMMSFHPQDL
RRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPD
HLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKD
NNLEECGLEMYFSVDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQ
TQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLVDWQRHTIYRHYARSSKQILWFW
QFVKEMDNEKRMRLLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFN
RLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaacttcaagttactgtgctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccgtacgtggaggtggctgtggacggccagtcgaagaagaccgag
aaatgcaacaatacacacaaccccaaatggaagcagtcactgacagtaattctcacacct
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaagccgacatcttattg
ggaatggctacattggagatcagtgaaaccctaaagtccaatgatatgaaactctctgag
gtggtgcacaccctgcagctgtgttcagaccgagaccacactgacgtggtgggggacctg
tcagtctgtctggacggcatgcaggtggacccagagacattcacctctgcagagagggac
cacgttgctgttccaaacggggaggtgagacagaacagagatagtgtcaacagtgataac
ataccacccagatccagcagggacacttccccctccagtgactccacagaggactgggtc
atcgtccccaacggccacacggtcaacagcatgggttctcctgccccatccccagggggc
tccaagtccacacgtccccccagacctgcacggcctcccccacccaccccccgcagacca
gccgcatccccagcctcctccagcagctctacccatagcgaggtgagtgagcccccggct
tcatacggctcgtccctggcctcggccagcggggcctcctcaaacccccctcaggagaac
ggagcagcacccacacaggcagccagcgcccccccagccatcggggcaccggccggtgca
cccccaaccggtgggcccccccgagtcatccctaacggcccactgcctccaggctgggag
cagagggtggaccagaatggccgcatgtatttcgtggatcacattgagaagaggacgaca
tgggaccgaccagactctctcccctctggctgggagcggcgtgtggaccccatgggcagg
gtgtacttcgtggaccacatcacccggaccaccacatggcagcgccccacgcaggagtct
gtgcgcaactatgaggagtggcagcaccagcgcagccagctgcagggggccatgcagcag
ttcaaccagaggttcatttttgggctccaggatcagcaaatagctgcagcaaacaaagag
tttgacccacttgggccgctgccacacggctgggagaagcgaacagacaccaacggcagg
gtttattttgttcaccacacaacgcggatgactcagtgggaggacccacggacacaaggg
ctgctgaatgacaagcccctacctgaaggctgggagatgaggttcacagtggatggcatc
ccctactttgtggaccacaaccggagaaccaccacctacatagaccctcgcacgggcaaa
tcctcccttgagaacgggccccagattacctacgtcagggacttcaaagcgaaagtgcag
tacttcaggttctggtgtcagcaactgtcaatgccacagcacatcaagatcaccgtcacc
cgcaaaaccctgtttgaggattcattccagcaaatgatgagctttcatccacaagatctc
aggcggagactgtggatcattttccctggagaggagggcttggactacggaggagtggca
agggagtggttcttcttgctatcccacgaggtgctgaacccaatgtactgcctgtttgag
tatgccggcaaggacaactactgtctccagatcaaccctgcctcctatatcaaccctgac
cacctcaagtacttcaagttcattggacgattcattgccatggccttgttccatgggaag
ttcatcgacacaggattctccctgcccttctacaagcgcatcctgaacaaacccctggcc
ctgaaggacctggaatccatcgaccctgaattctacaactccctcatctggatcaaggat
aacaacttggaggagtgtggtctggagatgtacttctctgtggacaaggagatcctgggg
gaggtcaccactcacgagctgaagccagacggaggcaatgtcttggtcactgaggaaaac
aaagaggaatacatcaggctggtggcagagtggaggttgtccagaggggtggaggagcag
acccaggccttcttcgagggcttcaatgaggtccttccccagcagtacctgcagtacttc
gacgccaaggaactggaggtgatgctgtgtggcatgcaggagatagacctggtggactgg
cagaggcacaccatctacaggcactacgcacgcagcagcaagcagatcctctggttctgg
cagtttgtgaaggagatggacaatgagaaacgtatgaggctgctgcagtttgtcaccggc
acctgtcggctccccatgggtggcttcgctgacctcatggggagtaatggcccacagaag
ttctgcattgagaaggtgggcaaagaaaactggcttccaagaagtcacacttgctttaat
cgactggacctgcccccttacaagagctacgagcagctgaaggaaaaactgatgtttgcc
attgaggaaactgagggcttcggacaggagtag
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