Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370744
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Entry
139370744 CDS
T10872
Name
(RefSeq) vitamin D3 receptor B-like isoform X1
KO
K08539
vitamin D3 receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139370744
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139370744
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139370744
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139370744
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139370744
Nuclear receptors [BR:
ocla03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
139370744
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
139370744
NCBI-ProteinID:
XP_070966515
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Position
17:complement(35525599..35600041)
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AA seq
449 aa
AA seq
DB search
MVKKRVAKSLSPIYKKGHAKIPVMETTAVSTTTLANDEFDRNVPRICGVCGDKASGFHFN
AMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTD
EEVQRKKDLIQRRKDEEAQREAQRPRLSEEQSQVIATLVEAHHKTYDDSYSDFNRFRPPV
REGPVTRSASRAASLHSLSDASSDSFSHSPESVDTKLMNFSNLLMMYQEQGGSPDSDDDG
SKLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFNL
EDMSWSCGGPDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSP
DRPGVQDHGRIETLQDHLSETLQAYIQLHHPGGRLVYAKMIQKLADLRSLNEEHSKQYRS
LSFQPEHSMQLTPLVLEVFGSEFTRISHV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaagagagttgccaagtctttatctcccatctacaaaaaagggcatgccaaa
atcccagtaatggagactacggctgtgagtaccaccactctggccaatgatgagtttgac
aggaacgtgccgcggatctgcggtgtgtgcggggacaaggcctccggattccacttcaat
gccatgacctgcgagggctgcaagggcttcttcagacgcagtatgaagcgcaaggccagc
ttcacctgtcccttcaacggcagttgcaccatcaccaaggacaaccgccgccactgccag
gcctgccggctcaagcgctgcgtggacattggcatgatgaaggagtttattctgacagac
gaggaggtgcagaggaagaaggacctgattcaacggagaaaggatgaggaggcgcagagg
gaggcgcagcgaccccggctgagcgaggagcagagccaggtcatcgccacgctggtggag
gctcaccacaagacctacgacgactcctactctgacttcaaccgcttcaggcctccggtc
cgagaaggcccagtgacacgcagtgccagcagagctgcctctctccactctctatctgat
gcctcatctgactccttcagccactctccagagtcggtggacactaagctgatgaacttc
agtaacctgctgatgatgtaccaggagcaggggggcagcccggactccgacgacgacggc
tccaagctctccatgctgccccacctggccgacctggtcagctacagcatccaaaaggtc
atcggcttcgccaagatgatccctggattcagggagctgacggctgaggaccagattgcc
ctgctcaagtcgagtgccatcgaggtgatcatgctgcgctccaaccagtccttcaacctg
gaggacatgtcctggagctgcggagggcccgacttcaagtactgcgtcaacgacgtcact
aaagcgggccacactctggagctgctggagcccctggtcaaattccaggttggcctgaaa
aaactcaacctccacgaggaggaacacgtgctgctcatggccatctgcctactctcccca
gaccgtccgggcgtgcaggaccacgggcgcatcgagaccctgcaggaccatttgtcggag
acgctgcaggcctacatccaactgcaccacccgggcggccgcctcgtgtacgccaaaatg
atccagaagctggcggacctgcgcagcctgaacgaggagcactccaagcagtaccgctcg
ctgtccttccagcccgagcacagcatgcagctgaccccgctggtgctggaggtgttcggc
agcgagttcactcgcatatcgcacgtctga
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