Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371085
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Entry
139371085 CDS
T10872
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00600
Sphingolipid metabolism
ocla00604
Glycosphingolipid biosynthesis - ganglio series
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
139371085
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
139371085
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139371085
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
139371085
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
Glycolipid
139371085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Motif
Other DBs
NCBI-GeneID:
139371085
NCBI-ProteinID:
XP_070967239
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All DBs
Position
17:complement(52541155..52570712)
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AA seq
532 aa
AA seq
DB search
MRSLRKTVLLAIVASVVLVVALLHSWPTRAYTTVDVRQRPGPIVERHLEERLPEPDQRSA
NIPYRLKESVTGLLARNGCVCEGESGGVNLPFAQLLFPRVSAHPLHTAFDASELEEMKRR
RAKEYQGFQMRSQTPVDMLIVAEANNPLQYPTQGVEVRPLKTILIPGLALQDLPRELYTV
NFTSTLGVLNVAAEVEGVKVKGDGEMHMTLMSSLLPNLNRQLQFVSYTNTLFHPSTADTV
QFETEGHQAMFTIKIRHRVTPKLYNTGPKGEYNISALVTIATKTFLRYDKLQDLIDSVRR
YYPAVTIVIADDSENPKTVSGPYIEHYIMPFGKGWFAGRNLAVSQVTTKYLLWVDDDFIF
TANTKLEKLVDVLEKTTLDLVGGAVREATGYTATYRQTISIEQGEEEEGDCLHMRRAFHH
IIQGFPNCVVTDGVINFFLARTDKVQQVGFDPRLARVAHLEFFIDGLGSLHVGSCDDVIV
NHATKIKLPWVSQSESDKTYAKFRYPPASSDATHTKNGLLYFKNHFQCLTHN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccctgaggaagacagtgttgttggccattgtggcatcagtggtgttggtggtt
gccctcctccattcttggcccaccagggcctacaccacagtggatgtccgccagagacca
gggcctatagtagagaggcacctggaggagaggctcccagaaccggaccaaagatctgcc
aacatcccctatcgcctgaaggagagtgttacaggtctgttggcacgtaacgggtgcgtg
tgtgagggtgagagtggtggcgtgaacctgccctttgcccagctgctgttcccacgggtg
tcggcccaccccctgcacactgcttttgatgcctctgagctggaggagatgaaaagacgg
agggccaaggagtaccagggcttccagatgaggtctcagactcctgtagatatgctcatt
gtggccgaggccaacaatcctctgcagtacccaacacagggggtggaagtacggcccctc
aaaaccatactcatcccagggcttgccttacaagaccttcccagagagctgtacacagtc
aacttcacctccaccctgggagtgttaaatgtggcagcggaggttgagggggtaaaggtc
aaaggtgacggggagatgcacatgaccctgatgagcagcctgctgcccaacctgaaccgg
cagttacagtttgtctcctacaccaacacactattccaccctagtacagcagacacagtg
cagtttgagaccgagggacaccaagccatgttcaccatcaagatccgtcatcgtgtaact
ccaaaactctacaacacaggacccaaaggggaatacaacatcagtgcccttgttacgata
gcaaccaaaactttcctgcgctatgacaagctccaagatctcatcgacagcgtgcgacga
tactatcccgctgttaccatagtaatagctgatgacagcgaaaaccccaagactgtctct
ggcccctacatcgaacattacatcatgccatttggaaagggatggtttgcaggacggaac
ctagctgtttcccaggtgaccactaaatatctgttgtgggtggatgatgactttatcttc
acggccaacaccaagctggagaaactagtggacgtactggagaagaccaccctggatctg
gtgggtggtgcagtgcgggaggccacaggctacactgccacctacaggcagaccatctcc
attgagcaaggggaggaggaggagggcgactgccttcacatgcggagggccttccaccac
atcatacagggcttcccaaactgtgtggtcactgacggggtcatcaacttcttcctggca
cgcacagacaaggtccagcaggtgggcttcgacccccgcctggccagagtggctcacctg
gagtttttcattgatggccttggctcgcttcacgtgggatcctgtgatgatgtcatcgta
aatcacgccaccaagatcaagcttccctgggtcagccaatcagagagtgacaagacttac
gccaagttccgctacccaccagcctcctcggacgccacacacaccaaaaatggcctcctc
tattttaagaaccacttccagtgtttgactcacaactaa
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