Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371433
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Entry
139371433 CDS
T10872
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139371433
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139371433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139371433
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139371433
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
139371433
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
139371433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
139371433
NCBI-ProteinID:
XP_070967948
LinkDB
All DBs
Position
17:76890531..76902108
Genome browser
AA seq
672 aa
AA seq
DB search
MSDQQDEMAAMVESGGGFLQKRNTNTGQDSQQPSPLALLAATCSRIDTPGESDSGSEQQL
DLSQAQLTQTANGSWQIIPVSLGSSSGSNTITTDSTGMVMTAGDSGKNRGQQVLTSVSSG
HQGQQQYVLSSAPSLQGQQVLTMSGGQVVSMPNIHYQVIPQFQTVDGQHLQFAQAGVQQD
PNAAGAGQFQLVSSPNGGQQLVRTGSGGNILTMPAGVLQQAIPLQNLGLGNSVLQNNQGQ
FQLANMPGLLNGNITLLPVSAASGSEGDGGSNQQLMQQVVSTSGTYYTNSTTTTTQTGTS
YGGMTQQTQSTNGFQNSGGGIPIQPDNRDQPQQILIQPQQLIQGGTSLQTISAGGQVFAT
PTLTQDALQNLQIQTLPNTSPILLRTVGLNGQVSWQTLQLQSPAGTQITLAPMQGLSQLG
QAQGGTMQLPGLHTINLNTLQNSGLQMHQLQGVPITISNTAGDQGLQAGGDSLDDGTVME
EGDTSPQPQNRRTRREACTCPFCKDGEARDPNKKKQHICHMPGCGKVYGKTSHLRAHLRW
HTGERPFVCGWSFCGKKFTRSDELQRHKRTHTGEKKFTCTECPKRFMRSDHLSKHLKTHL
NKKGTTGGAVTSDNSAPQSGGGGATDAGGVVNDQHALIAMETLSPEGIARLASSGINVMQ
VADLHSINSNGY
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaacaggatgaaatggccgcgatggtggaaagcggtggaggcttccttcaa
aagcgaaacacaaataccggacaagactcccagcagccctctcctttagctctgttggca
gcgacctgtagtagaatcgacaccccaggcgagagtgactccggctccgaacaacagtta
gacctaagccaagcccagctgacccagacagccaatgggagctggcagatcatccctgtc
agtctcggtagctccagtggttccaacaccatcaccaccgactccactggcatggtcatg
accgcgggcgactcggggaagaacagggggcaacaggtgttgacgtcggtctccagtggg
caccagggacagcagcagtatgtgctgtcctcagctccttctctacagggccagcaggtc
ctcaccatgtctgggggccaggttgtgtccatgcccaacatccattaccaggtgatccct
cagttccagacggtggatggccagcatctacagtttgcccaggcaggggtgcagcaggac
cctaatgcagcaggggcaggacagttccagctagtctcctcgcctaacgggggtcagcag
ctggttagaacagggagtggaggaaatatcctaaccatgcccgccggggtcctccagcaa
gccatccccctacagaacctaggtctgggtaacagtgtcctgcagaacaaccagggccag
ttccagttggctaatatgcctggtctcctaaatggcaatatcaccctccttccggtcagt
gcagcaagtgggtctgaaggggacggaggctctaaccagcagctgatgcagcaggtagtg
tcaacctctggcacgtactacaccaactcaaccaccaccaccactcagacaggcacctcg
tatggaggcatgacacagcagactcagagcaccaacggcttccagaactctggtggtggg
atccccatccagccagataacagagatcagccgcagcagatcctcattcaaccccagcag
ctcatccaaggagggacctccctgcagacaatctcagctgggggacaggtgttcgcgacc
ccaacgcttacccaggatgccctgcagaacctgcaaattcagaccctccccaacacctct
cccatcctgctgaggaccgtcgggctcaacggacaggtgagctggcagaccctccagctg
cagagcccagcggggacccagatcaccctggcccccatgcagggtctctctcagctgggc
caggcccagggaggtaccatgcaactccctggcctgcacaccatcaacctcaacacactg
cagaactctggtttacagatgcaccagctacaaggagtccccatcaccatctctaacaca
gctggagaccagggtttgcaggcaggcggagacagtttggatgacggcacagtcatggag
gagggagacacgtcccctcagcctcagaaccgccggacacgaagggaagcctgcacctgt
cccttctgcaaggacggagaggcgagagatcccaataagaagaagcagcatatctgtcac
atgccaggttgtgggaaggtgtacggtaagacatctcacctgagagctcaccttcgctgg
cacactggagaacgacccttcgtctgcggctggtccttctgtgggaagaaattcactcgc
tcggacgaactgcaacgccacaagaggacacacacaggtgagaagaagttcacgtgtacg
gagtgtccaaagcgattcatgcgcagcgaccacctctccaaacacctcaagacccacctc
aacaagaaaggaaccaccggtggcgctgtgacctccgataactccgcccctcagtcgggt
ggaggcggagccacagatgccgggggtgtggtcaatgaccaacacgccctcattgccatg
gagacactgtcgcccgagggcatcgcccgattggccagcagcggcatcaacgtgatgcag
gtggctgacctgcactccatcaacagtaatggatattga
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