Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372548
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Entry
139372548 CDS
T10872
Name
(RefSeq) T-cell-specific surface glycoprotein CD28-like isoform X1
KO
K06470
CD28 antigen
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
ocla04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139372548
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
139372548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139372548
04090 CD molecules [BR:
ocla04090
]
139372548
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Other
139372548
CD molecules [BR:
ocla04090
]
Proteins
139372548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
DUF2973
Motif
Other DBs
NCBI-GeneID:
139372548
NCBI-ProteinID:
XP_070968387
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All DBs
Position
18:26665243..26675225
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AA seq
214 aa
AA seq
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MISSHNCKDKLRTFHVVRVSVNGTASVSCPNLTGKDQEEMRFHLYLGLVEVGNHTHDSAH
NHNSTETVSPVGEGLGLRVNEQDHTVSFVLSGMTTERAGVYTCEGQPMYPPPIEKVQDET
QTVVLVEAYQCQAGKPVGCVGSRVDGVPVWAWVLGFWITIIYGLAVTVIAFVIWLRLRRV
KCSQSDYMNIKPKAPLWGPRKKQGVRHPIRMGRY
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgataagctcccacaactgtaaagacaagctcagaacgttccatgtagtccgtgtgtct
gtcaacggcactgcatcggtcagctgccccaacctgacaggcaaggaccaggaggaaatg
agattccacctttacttgggcttggtcgaagttggcaaccacactcacgacagtgctcac
aaccacaactccacagagaccgtgagtcctgttggggagggtctggggctgagggtgaac
gaacaggaccatacggtcagttttgtcctctctggaatgaccacggagcgcgctggggtc
tatacctgtgaggggcaacccatgtacccacctcccattgaaaaagtacaagacgagact
cagactgtggtcctggttgaagcataccagtgccaggcaggaaagcctgtgggatgtgta
ggctctagagtggatggtgtccctgtttgggcatgggtgctggggttctggatcaccatc
atctatggcctggctgtcactgtcatcgcctttgtcatctggctcagactgaggagagtg
aagtgttcccagagcgactacatgaacatcaaacccaaagctccactctgggggcccagg
aagaagcagggggtccggcatccaatccgaatgggacgatactga
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