Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372661
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Entry
139372661 CDS
T10872
Name
(RefSeq) CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like
KO
K00780
beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4A) [EC:
2.4.3.2
2.4.3.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00512
Mucin type O-glycan biosynthesis
ocla00533
Glycosaminoglycan biosynthesis - keratan sulfate
ocla00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ocla00604
Glycosphingolipid biosynthesis - ganglio series
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
139372661
00533 Glycosaminoglycan biosynthesis - keratan sulfate
139372661
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
139372661
00604 Glycosphingolipid biosynthesis - ganglio series
139372661
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139372661
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.3 Sialyltransferases
2.4.3.2 beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3-sialyltransferase
139372661
2.4.3.4 beta-galactoside alpha-2,3-sialyltransferase
139372661
Glycosyltransferases [BR:
ocla01003
]
Terminal extension
Sialyltransferase
139372661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_29
Motif
Other DBs
NCBI-GeneID:
139372661
NCBI-ProteinID:
XP_070968541
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All DBs
Position
18:44706994..44719771
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AA seq
332 aa
AA seq
DB search
MIIFRHRKGCLITVLLCLTIFVLHTGHTGQLFSKSLVDLAKIALRLLGGKIFPSHCACIK
CMTQPDDDLWFQKRFIRSIKPFLTRENKKLNEDTRAWWQKLQDDRSTATFREVVEHLFQV
IPDDDLYMDAGPERCRTCAVVGNSGNLKGSHYGALIDSNDVIIRMNMAPTFSYEEDVGSR
TTHQVMYPESAIDLDNTTRFLLIPFKTLDLQWLPGAITNGSNITYSYLPLRPKIKANKDL
VLVLNPAFMKYVHQVWLDYQGKYPSTGFMALILAIHICDEVNVYGFGKDKDGHWHHYWEA
STNKWLKTGIHDGNYEYNVVMKLSEKFKLHIY
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgattatcttcaggcatagaaaaggctgtcttatcaccgttctactctgcctcactatc
tttgtgttacatactggacacactgggcagctattctccaagtcacttgttgatttggca
aaaattgcccttcggctgctgggcgggaaaatctttccaagtcattgtgcatgtatcaaa
tgtatgactcagccggatgatgacctctggtttcagaagcgcttcatcaggtctatcaaa
ccatttctgaccagagagaacaagaaacttaatgaagataccagagcatggtggcagaaa
ttgcaggatgaccgtagcacagccaccttcagagaggtggtggaacacttgttccaggtc
atccctgatgacgacctctacatggacgcaggccctgagcgctgtaggacctgtgctgtg
gtggggaactctgggaacctcaagggctcccactacggagccctcatagactccaatgat
gtcatcatacgaatgaacatggctcctacctttagctatgaggaggatgtaggaagccgg
accacacatcaagtcatgtacccagagagtgctatagatctggacaacaccaccaggttc
ctgctgatccctttcaagactctggaccttcagtggctacccggcgccatcaccaatgga
tctaacatcacttactcatatttacctcttagaccaaagataaaggccaacaaagacttg
gtcttggttcttaatcctgcatttatgaaatatgttcatcaagtctggcttgactatcaa
ggcaaatacccctctactggattcatggctttaatattagccatacacatttgtgacgag
gtgaatgtgtatggatttggtaaagacaaagatggccactggcaccactactgggaagca
tcaaccaataaatggctcaaaactggaatacatgatggaaactatgagtacaacgttgtc
atgaagctctcggaaaaattcaaactacatatatattaa
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