Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372927
Help
Entry
139372927 CDS
T10872
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00260
Glycine, serine and threonine metabolism
ocla00270
Cysteine and methionine metabolism
ocla00670
One carbon pool by folate
ocla01100
Metabolic pathways
ocla01230
Biosynthesis of amino acids
Module
ocla_M00035
Methionine degradation
ocla_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
139372927
00270 Cysteine and methionine metabolism
139372927
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
139372927
Enzymes [BR:
ocla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
139372927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
139372927
NCBI-ProteinID:
XP_070968900
LinkDB
All DBs
Position
18:complement(6097887..6115800)
Genome browser
AA seq
588 aa
AA seq
DB search
MPAVPSLKDSSVLGPVCPHAARLRVINGNGDANGSSKVQEGLLQLPTKGGVRDKLEVEDV
TGTIQAVGERKWIRPDLPSRCTWRLGGNHADSPHTHPQQTKAPKILTNILRRIGDTPLVR
MNKIPKTFGLKCEVLAKCEYFNAGGSVKDRISLRMVEDAERAGHLKPGDTIIEPTSGNTG
IGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSARFDSPESHVGVAWRLK
NEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGGTITGIARKLKER
CPNIQIIGVDPEGSILAEPEELNKTDKTQYEVEGIGYDFIPTVLDRSVVDSWYKSNDEES
FNMSRMLVRDEGLLCGGSSGTAMAAAVRVAKDLKEGQRCVVILPDSIRNYMTKFLSDKWM
FQKGFLKESDIMVNKPWWWNLKLQGLNLSAPLTVLPTVSCQKTIKILKENGFDQAPVVDE
AGLVLGMVTLGNMLASVLAGKIKPSDPVNKVIYTQFKQIRLTDNLGKLSRILETDHFALV
VHEQIQYLTDGSPSLKQMVFGVVTAIDLLNFVTAREKRERSFSECSDL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggtcccctcccttaaagacagcagcgtcctgggccctgtgtgcccgcacgct
gccaggctacgcgtcatcaacggcaatggggacgccaacggatcctccaaggtccaggaa
gggctgttacaactcccaaccaaggggggcgtcagagacaagctagaggtggaggacgtg
actggaaccatccaggcggtgggggagaggaagtggatccgtcccgaccttcccagccgg
tgcacctggagactggggggcaaccacgccgactccccccacacccatcctcaacagacc
aaagctcctaaaatcctcaccaacatcctccggaggatcggtgacaccccgctggtgcgc
atgaacaagatccccaagaccttcggcctcaagtgtgaagtcttggccaagtgtgagtac
ttcaacgcgggcggcagtgtgaaggataggatcagtctgcgtatggtggaggatgcagag
agggcaggacatctgaaaccaggagacaccatcatagagcccacctcaggcaatacaggt
atcggtctggctctggctgcagctgtgaagggttaccgctgtatcattgtcatgcctgag
aagatgagcatggagaaggtggatgttttgagagccctgggcgcagagatcgtccgtact
cccaccagcgctcgtttcgattcaccagagtctcacgtgggcgtggcttggcgcctgaag
aacgagatccccaactctcacatcctggaccagtaccgtaaccctagtaaccccctggcc
cactatgacaccacagcagaggagatactggagcagtgtgatgggaaagtggacatgctg
gtggcaggcgctggcacaggcggcaccatcactggcattgcccgcaaactgaaggagagg
tgcccaaacatccagatcatcggtgtggaccctgaaggctccatcctggctgaaccagag
gagctgaacaagacagacaagacccagtacgaggtggagggcatcggatacgacttcatc
cccactgtactggaccgatcagtggtggatagctggtacaagtccaacgatgaggagtcc
ttcaacatgtcccgtatgctggtcagagacgagggcttgctgtgtggtggcagctcgggc
acggccatggcagcggcggtgagggtggccaaggacctgaaggagggccagcggtgtgtg
gtcatcctgccagactccatccgcaactacatgaccaagttcctgagtgacaagtggatg
ttccagaaaggcttcctgaaggagtcagacatcatggtaaacaaaccctggtggtggaac
ctgaagctgcaggggttgaacctctctgcccctctgaccgtcctgcccacggtcagctgt
cagaagaccatcaagatcctgaaggagaacggctttgaccaggcccctgtagtggacgag
gctgggctggtcctaggaatggttactttggggaacatgctggcctctgtgctggctggg
aagatcaaaccctcagacccagtcaacaaggtgatctacacccagttcaaacagatccgt
ctgactgataacctggggaagctctctcgtatcctggagacggaccattttgccctggtg
gtacacgaacagatccaatacttgacggatggctcccccagcctgaagcagatggtgttt
ggtgtggtgacggccatcgacctgctcaactttgtcacggccagggagaagagggagagg
tccttctctgagtgcagtgacctgtga
DBGET
integrated database retrieval system
