KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375065
Entry
139375065         CDS       T10872                                 
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04620  Toll-like receptor signaling pathway
ocla04621  NOD-like receptor signaling pathway
ocla04622  RIG-I-like receptor signaling pathway
ocla05168  Herpes simplex virus 1 infection
SSDB
Other DBs
NCBI-GeneID: 139375065
NCBI-ProteinID: XP_070972566
LinkDB
Position
19:complement(33096792..33115038)
AA seq 573 aa
MSAGRNADGRELQIPLQQCALSLAALSLAQRPWPSDHVAGFLPQHGGFRDHFVATPEPKY
CCESCKLVLCNPRQTECGHRFCETCISDQLSKPNPVCPEDKEPLFKDKVFRDVCCHREIM
ALRVYCRSEKNGCKEQISLQQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMQKMAMTELQKHKDTVCPSFPVACPNHCTFPSILRSKLTSHQHECPKAHVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKVEDVKGELLERYKVLPGLS
SRLSETLSHYEEMREKNRQLDQKLNTMQELMSSHSEKLLEMELELRSLRSVREEVETLRG
TVESIRSRVATLEGGRGGANPATHTLETQLSRHDDMLSVHEIRLADMDLRFQVLETASFN
GMLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgtcagcagggcggaatgcggacgggcgggagctgcagatccccctccagcaatgcgct
ctctccctggccgctctctccctggcccagcgcccctggcccagcgaccacgtggcaggc
ttcctaccccagcacgggggcttcagggaccacttcgtagccaccccggaacccaagtac
tgctgtgagtcctgcaagctggtgctctgcaaccccaggcagacagaatgcggacacagg
ttctgtgaaacctgtatctctgatcagctaagcaaaccgaatccagtatgtccagaagat
aaggaacctctgttcaaagacaaggtcttccgtgacgtatgctgccatagagagatcatg
gctctgagagtgtactgcaggagtgaaaagaacggctgtaaggagcagatcagtttacag
caggtcatggatcatttaaatgtgtgtccgtattttgaggtgccatgccctttgggaaag
tgcaaagagaagatgatgcgcaaagacattcctgaacatttgagttggaaatgtaaacac
agggagaccacctgtgaattctgcatgcagaagatggccatgactgagttacagaaacac
aaagacaccgtttgtccttcatttccggtggcctgccccaatcattgtactttcccctcc
atcttacggagcaaactgacgagtcatcaacatgagtgtcccaaggctcatgtcacctgc
tcctttatccgctttggatgcaatttcaagggtctcaaccaagacatgagggaccatgaa
tctagctttgcctctgaacatctgcggttgatggcaaccagaaacactacactggaggcc
aaggtggaggatgttaaaggagagcttctggagcggtacaaggttctgccgggcctgagc
agccgtctgtctgaaacattgtctcactacgaggagatgagggagaagaatagacagctg
gaccagaagctcaataccatgcaggagttgatgagttcccactctgagaagctcctggag
atggagctggagctgaggtctctgaggtctgtccgagaggaggtggagaccctcagagga
accgtggagagcatccgctccagagtcgccactctagaaggagggcggggcggggccaac
ccagccacacacacactagagacacagctctcccgtcacgatgacatgctgagcgtccat
gagatccgactagcagacatggacctgcgcttccaggtcctagagacggcctccttcaat
gggatgctcatctggaagatccgtgactacaagcggcggaaacaagaagccgtggcgtca
aagaccctgtcgctctacagccagcctttctacactggctactttggctacaagatgtgt
gcccgggtctacctgaacggagacggcatggggaagggaacccacttgtcgctgttcttc
gtggtgatgcgtggcgagtacgatgcccttctgctctggccctttaagcagaaggtgacc
ttgatgctgatggatcagggcccagccagaaagcacttaggggatgcctttaaaccagac
cccaatagcagcagcttcagacggcccacggcagagatgaacatagcctcaggctgcccg
ctgttcgtggcccagactgtgctggagaacggtacttacatcaaggacgataccatcttc
attaaggtcacagtagatacgtctgacctccctgacccctga

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