Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375914
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Entry
139375914 CDS
T10872
Name
(RefSeq) metal-response element-binding transcription factor 2-like isoform X1
KO
K11485
metal regulatory transcription factor 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139375914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139375914
03036 Chromosome and associated proteins [BR:
ocla03036
]
139375914
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
139375914
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
139375914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
Prok-RING_1
PHD_ash2p_like
ASH2L-like_WH
DUF4537
Chromo
53-BP1_Tudor
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
139375914
NCBI-ProteinID:
XP_070973975
LinkDB
All DBs
Position
20:12111053..12134825
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AA seq
595 aa
AA seq
DB search
MRDSTALERLPVHQQKAPSLRQQCKTPVSLTSVHSTEDRHGEDTDTKLGNRFDEGQEVLA
RWSDGLFYLGTITKINKDKHRCFVVFEDRSKSWVLWKDIQTGDEGGEDMVCTICQDECSE
DPNEIVICDKCGQGYHQLCHSPIIDSSLIDTDEKWLCRECVFATTEKGPKALQELKQSLP
YSLEDLAWDQGHKTNIQQCYCYCGGPGDWYLKMLQCNRCKQWFHEACIQCFKTPMLYGDR
FYLFICSVCSSEPEYLKRLPLKWVDVAHLSLYNMSVIHKKKYFDSELELMTYINDNWEQM
QLGELSATPQSDRYESILEALNSNHSMFMSGKEIKKKKHLFGLRIRFPPGPQSSDLLANR
GEPERASNEIKIKGRKAIKPLTNTSEVTNGVVKKAKKMKKQGGHSLATLAKRSHSSELLA
QDMKPPPPLDTQSLRSSRSDRSLPSSSTSEMESISAVRTTETTSTSLSRQSSLCSSSKMF
TGRHWPIAQPPLKRRRGRPRRAPLQPPNPEIPPPHQPDPHHLPEPPIPLPGLHSTDIVHR
LGQGGQLSHLKSSISSYFGVAGRLECGEKYRILARRVTLDGKVQYLVEWEGVTAS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagagactcaacggcattagagcgcttgccggtccaccagcagaaagcaccttccctt
cggcagcagtgcaagacgccagtgtccctgaccagcgtccactctaccgaggatagacat
ggagaggacacggacaccaagctcggcaacaggtttgacgagggacaagaggtcctagcc
cgatggtcggatgggctgttttatttggggactatcacaaagataaataaggacaagcac
cgctgctttgttgtctttgaagatcggtccaagtcctgggttctgtggaaggacattcag
acaggggacgagggaggagaggacatggtctgcacaatatgccaggatgagtgctcagag
gatcccaacgagattgtcatctgcgacaagtgtggacaaggataccaccagctctgccac
tcacccatcatcgactccagcctgatcgacacagatgagaagtggctctgtagggagtgt
gtgttcgccacaacagagaagggtcccaaagccctgcaggagctgaagcagtctctacct
tattccctagaggacctggcgtgggaccagggccacaagaccaacatccagcaatgttac
tgctactgtggagggcctggagactggtacctgaagatgctgcagtgcaacaggtgtaag
cagtggttccacgaggcatgtatccagtgttttaagacgcccatgctctatggagacagg
ttctatctatttatttgctcagtttgcagtagtgaaccagagtacctcaaacgactgcct
cttaaatgggtggacgttgcacacctgagcctctacaacatgagtgtgattcacaagaag
aagtactttgattctgagctggagctgatgacttacatcaacgacaactgggagcaaatg
cagctcggggagctttcagccactcctcagtcggaccgatatgaaagtattttggaagca
ctgaatagcaaccacagcatgttcatgtcagggaaggagatcaagaagaagaagcacctc
tttggactgaggatccgttttcctccgggtccccagagctctgacctgctggccaacaga
ggggagccagagagggcctccaacgagatcaagatcaaaggcaggaaggctatcaagcct
cttaccaacacaagtgaagtaaccaatggcgtggtgaagaaggccaagaagatgaagaaa
cagggaggtcactccctggcgactctggccaagcgaagtcactccagtgaactcttggcc
caggatatgaagccaccaccacctctggatacccagtccttaaggagcagcaggagtgac
agatctcttccctcctccagtacctccgagatggaatccatcagtgccgtccgcaccact
gaaactacctcaactagcctctccagacagtccagcttgtgtagctccagtaagatgttc
acgggtcgccactggcccatcgcccagccccccctgaagaggagacggggccggccacgt
cgggcccccctccagccccccaaccctgagatcccccctcctcaccagccagacccccac
cacctcccggagccccccatccccctgccggggctccactccacggacatagtgcaccgg
ctgggccaaggtggtcagctgtcccacctgaagagctcaatcagtagctactttggggtg
gcaggccgcctggagtgcggggagaagtaccgcatcctagctcgccgggtcaccctggac
ggcaaggttcaatacctggtggagtgggagggcgtcactgcctcctaa
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