KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379053
Entry
139379053         CDS       T10872                                 
Name
(RefSeq) putative transcription factor p65 homolog
  KO
K04735  transcription factor p65
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010  MAPK signaling pathway
ocla04137  Mitophagy - animal
ocla04210  Apoptosis
ocla04218  Cellular senescence
ocla04620  Toll-like receptor signaling pathway
ocla04621  NOD-like receptor signaling pathway
ocla04622  RIG-I-like receptor signaling pathway
ocla04623  Cytosolic DNA-sensing pathway
ocla04625  C-type lectin receptor signaling pathway
ocla04920  Adipocytokine signaling pathway
ocla05132  Salmonella infection
ocla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    139379053
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    139379053
  09143 Cell growth and death
   04210 Apoptosis
    139379053
   04218 Cellular senescence
    139379053
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    139379053
   04621 NOD-like receptor signaling pathway
    139379053
   04622 RIG-I-like receptor signaling pathway
    139379053
   04623 Cytosolic DNA-sensing pathway
    139379053
   04625 C-type lectin receptor signaling pathway
    139379053
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    139379053
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    139379053
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139379053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocla03000]
    139379053
Transcription factors [BR:ocla03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    139379053
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 139379053
NCBI-ProteinID: XP_070977897
LinkDB
Position
21:40953231..40972177
AA seq 600 aa
MDGMYGWGQPPLNQGNSFIEIIEQPKPRGMRFRYKCEGRSAGSIPGEKSNDTTKTHPAIK
VHNYNGPLRVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVKK
KDVNEAVSCRLQTQNNPFNIPEAKVWEEEFDLNAVRLCFQASITLPTGELHPLEPVVSQP
IYDNRAPNTAELKICRVNRNSGSCRGGDEIFLLCDKVQKEDIEVRFFQDSWEGKGTFSQA
DVHRQVAIVFRTPPFYDTNLTEPIKVKMQLRRPSDREVSEPMDFQFLPSDPDEYRLIEKR
KRTEGMFQNLKLGSISGAMPAERPFNTARRTVAAKPAASQPVNLVAPPRAASVKPQPYYD
SPQPGQLFRTQPKAEPSSSTPAETWKFLNSLTLDSQHKATPVAQFTNPQASAATSQAFPT
VNLSDLHGFSFSTFASPQEPVSAAATPEPTSTFGVQDSQFRVDGPMVDEELPEFPSFSEV
HQSGTLDNINIDDFQAMLVQSGLAGEGPGNSRVSVAQAPCHLPATNPVVNNSCGGSTWMN
YPNSIVNLLQSEGMIDSSPGNSSQPAVLDDLDVFSSMDEDRLISILNSGNQAGFVSGHQT
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggatggaatgtatggatggggacagccccctttgaaccaagggaattctttcatagag
atcattgagcagcccaagccgagaggcatgaggttcaggtacaagtgtgaggggcgctcg
gcgggcagcatcccgggagagaagagcaacgataccaccaagacacaccccgccatcaag
gtgcacaactacaatggtcccctgcgtgtccgtgtctccttggtgaccaagaacccgcct
cacaagccccacccgcacgagctggtggggaaagactgcaaacatggctactatgaggca
gacttgcaggagagacgagtacacagttttcagaacctgggcattcagtgtgtgaagaaa
aaggatgtgaacgaagcagtttcctgtagactgcagacccaaaacaaccccttcaacatt
cccgaggcgaaggtgtgggaggaggagtttgacctgaatgcagtgaggctttgtttccag
gcttcgatcactctacctaccggtgaacttcaccctctggagcccgtggtgtctcagccc
atctacgacaatagagcacccaacacagcagaattgaagatctgtcgagtgaacagaaac
tctgggagctgcagaggaggggacgagatcttcttactctgtgacaaagtgcaaaaagag
gacattgaggtacggttcttccaggactcgtgggaggggaagggcaccttctcccaggcg
gacgtccacaggcaggtggccatcgtgttccgtaccccgcccttctacgacaccaacttg
accgagccaatcaaagtgaagatgcagcttcgcaggccctcggaccgcgaggtcagcgag
ccaatggacttccaattcctgccctccgacccagatgaatatagactgatagagaagcga
aaacggacagagggaatgttccagaatctcaagctggggtccatatcaggggccatgcca
gcagagaggcctttcaacactgccagaagaacagtcgccgccaagccagcagctagccag
cctgtgaacctagtggcgccccctcgtgccgcctctgtgaagccccagccctactatgat
agcccccagcctggccagctgttccgaacccagcccaaagcagagccctcctcctccact
ccagcagagacctggaagttcctcaacagcctgaccttggactcccaacacaaagccacc
cccgtggcccaattcaccaacccccaggcatctgcagccacctcacaggccttccccacc
gtcaacctgtcggaccttcacggcttctccttctccaccttcgctagtccccaggagcca
gtgagcgcagccgctaccccagagcccacctctaccttcggggtccaggattcccagttc
agggtggatggccccatggtggatgaggagctacccgagttccccagcttctctgaggtc
caccagtcagggacactagataacataaacatcgacgacttccaggctatgctggtccag
agtggtctggctggagaggggccagggaacagtagggtgtcggtcgctcaggcaccctgc
cacttacctgccaccaaccctgtggtcaacaacagctgtggcggcagcacctggatgaac
taccccaacagcatcgtgaacctgctccagagtgagggcatgatcgacagttctcctggc
aactccagccagccggccgtcctcgacgacctggacgtcttcagctccatggacgaagac
cgtctcatttccatcctgaacagtggcaaccaggccggtttcgtgtccggacatcagact
tag

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