Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379615
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Entry
139379615 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2-like
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04068
FoxO signaling pathway
ocla04110
Cell cycle
ocla04115
p53 signaling pathway
ocla04120
Ubiquitin mediated proteolysis
ocla04144
Endocytosis
ocla04218
Cellular senescence
ocla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139379615
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
139379615
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139379615
09143 Cell growth and death
04110 Cell cycle
139379615
04115 p53 signaling pathway
139379615
04218 Cellular senescence
139379615
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
139379615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139379615
04121 Ubiquitin system [BR:
ocla04121
]
139379615
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139379615
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139379615
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
139379615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
SWIB
Zn_ribbon_RanBP
zf-RING_2
FAM117
Motif
Other DBs
NCBI-GeneID:
139379615
NCBI-ProteinID:
XP_070978515
LinkDB
All DBs
Position
21:1199618..1218715
Genome browser
AA seq
486 aa
AA seq
DB search
MAENCERMSEWHRSSSQINTLDNEKLVRPKEKLLVLLQQAGADKDVFTMKEVIFYLGQYI
MKKQLYDMKQQHIVHCADDPLGAVLGVDSFSVKEPRVLFAMITQNLLAVKNQESQSVFTE
PRSHSEPDRGPKETDSDCHSSSTSERRRRRRSSDPEGTSSTQEEDGCESRKRHRSDSLSL
TFDDSMSWYVIGGLRRDRRSSESSVSHSNAEVGSLVSDACDDVLSQDLGSDSDNFSVEFE
VESIDSDAYSDPEEASVSGEDEVYEVTIFEAEDEDSFDDDTEITEADYWKCSKCEELNPP
LPRNCNRCWTLRMDWFPDSDSNSAAPNLKPLPPKPTPAPAEPDETEGLDVPDGKRAKSPL
PLLKDSQELMSVSGPDSQDSACSSQPSTSSSNSNGVGSGSSSSAPFSQEVMAPDLERFNS
LEAHLPASCLEPCVICQTRPKNGCIVHGRTGHLMACYTCARKLKKRNKLCPVCRQPIQSV
VLIYLS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaattgtgagagaatgtcagaatggcatagaagcagttcccaaataaatacc
ttggacaatgagaaacttgtacgacctaaagagaaactgctcgtgttattgcagcaggca
ggtgcagacaaagatgttttcaccatgaaagaggtgatattctacctgggccagtacatc
atgaagaaacagctttatgacatgaagcagcaacacatagtgcactgtgctgacgacccc
ctgggggctgtactgggagtggacagcttctctgttaaagaaccccgagttctcttcgct
atgatcacacaaaatctcctagcagtgaaaaatcaagaatcccaatctgtcttcacggaa
cccaggagccacagtgaaccggatagagggcctaaggagacggactcagactgtcattca
tcatctacctcagaacgcaggaggagaaggaggagtagtgaccctgaggggacgtcgtcg
acacaagaggaggacgggtgtgagtccaggaagagacataggtcagacagcttgtctctg
acctttgatgacagcatgtcctggtatgtgattggaggcctgagacgagaccggaggagc
agcgagtcttcagtctcacacagtaacgctgaagtaggttcattggtcagtgacgcgtgt
gacgatgttttgagccaggatctgggctcagactctgataacttcagcgtggagtttgag
gtggagtccatcgactcggacgcctacagcgatcccgaagaggcttcagtgtctggcgag
gacgaggtgtatgaagtcaccatcttcgaggcagaggacgaggactcgttcgatgacgac
actgaaatcacggaagcagactactggaagtgctcaaagtgtgaggagttgaaccctccc
ctcccccgaaactgcaaccgctgctggacgctaagaatggactggtttcccgattctgac
agcaactctgctgcccccaacctcaaacccttacccccaaagcctaccccagccccggca
gagcccgacgagaccgaaggtctggatgtccccgacgggaagagagccaagtcgccccta
cccctcctcaaagactcccaggaattgatgtccgtctctggccccgattcccaagactcg
gcctgctcctcccagccctccacctcttcttcgaactccaacggcgtgggctcaggctcg
tcctctagcgcccccttcagtcaagaagtgatggcaccggacttggagcgtttcaatagc
ctggaggctcacctccccgccagctgcctggagccctgcgtcatctgtcagaccaggccc
aagaacggctgcatcgtacacggacgcacagggcacctcatggcctgttacacctgcgcc
aggaaactgaagaagaggaacaagctgtgtcccgtctgcaggcagccgatccagtctgtc
gtcttaatttatctcagctga
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