KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139379626
Entry
139379626         CDS       T10872                                 
Name
(RefSeq) interferon gamma 1-like
  KO
K04687  interferon gamma
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050  Proteasome
ocla04060  Cytokine-cytokine receptor interaction
ocla04217  Necroptosis
ocla04350  TGF-beta signaling pathway
ocla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    139379626
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    139379626
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    139379626
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    139379626
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    139379626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ocla03051]
    139379626
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocla04052]
    139379626
   00536 Glycosaminoglycan binding proteins [BR:ocla00536]
    139379626
Proteasome [BR:ocla03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    139379626
Cytokines and neuropeptides [BR:ocla04052]
 Cytokines
  Interferons
   139379626
Glycosaminoglycan binding proteins [BR:ocla00536]
 Heparan sulfate / Heparin
  Cytokines
   139379626
SSDB
Motif
Pfam: IFN-gamma DUF809
Other DBs
NCBI-GeneID: 139379626
NCBI-ProteinID: XP_070978530
LinkDB
Position
21:complement(795302..798263)
AA seq 180 aa
MDVLSRAVMCFCLMGWMTLGWSNAAQFTSINMKRNIDKLKVHYKISKDQLFNGNPVFPKD
TFEDSERRVLTSVVLDVYLSIFGQMLNQTGDQEMIESLKYVKGKIQDLQKHYFLGRIPEL
RTHLQNLWAIETSDTTVQGKALSEFITIYEKASKLALKFHLKKDNRRKRRQAQRLKSHIM
NT seq 543 nt   +upstreamnt  +downstreamnt
atggatgtgttatcaagggctgtgatgtgtttctgcttgatgggctggatgactttagga
tggagtaatgctgctcagttcacatcaattaacatgaagagaaacatagacaaactgaaa
gtccactataagatctccaaggaccagctgttcaacggaaaccctgttttccccaaggac
acgtttgaggacagtgagcggagggtgttgacgagtgtggttctggacgtgtacctgagt
atcttcggccagatgctgaaccagacgggggaccaggaaatgattgagagtctgaaatat
gtcaaggggaaaattcaggatctccagaaacactatttcctggggaggatacctgagctg
aggacacacctgcagaacctgtgggccatcgagaccagtgacaccacagtccaggggaag
gctctgtccgagttcattaccatctacgagaaagcctccaaactggcccttaagttccat
ctaaagaaggacaaccgcaggaagagacggcaagcccagaggctcaaatcacacatcatg
tag

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