Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380167
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Entry
139380167 CDS
T10872
Name
(RefSeq) C-X-C chemokine receptor type 4-like
KO
K04189
C-X-C chemokine receptor type 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
ocla03260
Virion - Human immunodeficiency virus
ocla04020
Calcium signaling pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04144
Endocytosis
ocla04672
Intestinal immune network for IgA production
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139380167
03260 Virion - Human immunodeficiency virus
139380167
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139380167
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139380167
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139380167
09142 Cell motility
04810 Regulation of actin cytoskeleton
139380167
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
139380167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139380167
04050 Cytokine receptors [BR:
ocla04050
]
139380167
04090 CD molecules [BR:
ocla04090
]
139380167
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Chemokine
CXC Chemokine
139380167
Cytokine receptors [BR:
ocla04050
]
Chemokine receptors
CXC Chemokine
139380167
CD molecules [BR:
ocla04090
]
Proteins
139380167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
CXCR4_N
Motif
Other DBs
NCBI-GeneID:
139380167
NCBI-ProteinID:
XP_070978713
LinkDB
All DBs
Position
22:complement(11249427..11251403)
Genome browser
AA seq
357 aa
AA seq
DB search
MSSYYETIIFYNDNSSEESGDYDLGYEEPCNRVSGDDFQRIFLPTVYGIIFLLGIVGNGL
VLIVMGYQKKVQTKTDKYRLHLSVADLLFVLTLPFWAVDAASSWYFGGFLCTTVHVIYTI
NLYSSVLILAFISMDRYLAVVHATKSQSTRTFLADRVIYVAVWLPAVILTVPDIVFATAQ
NRVSRTICQRIYPQETSFYWMAGFRFQHILVGFVLPGLVILTCYCIIIAKLSQGSKGQVL
KRKALKTTVILVLCFFICWLPYCVGIFVDTLMLLNVISHSCALEQSLQTWISITEALAYF
HCCLNPILYAFLGVKFKKSARNALTVSSRSSHKILTKKRGPISSVSTESESSGALSS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttattacgagaccatcattttttacaacgacaacagctcggaagaatcaggg
gattatgacttgggctatgaggagccgtgcaacagagtcagtggtgatgattttcaaagg
atcttcttaccgacagtttacggaataatattcctgttaggaatcgtcgggaatggactg
gtattgatagtgatgggctaccagaaaaaggtccaaacgaagactgataaatacaggctg
catctctcggtggccgacctcctattcgtcctcacgctacctttctgggcggtggatgcg
gccagcagttggtactttggcggtttcctctgtaccactgtgcatgtgatctacaccatc
aacctgtatagcagcgtcctcattctggcctttatcagtatggacaggtacctggcagtg
gtgcatgccaccaagagtcaaagcaccaggacgtttcttgcagacagagtgatctatgta
gctgtatggctacctgctgtgattctcaccgtgcctgacatagtgtttgccacagctcag
aatagagtctccagaaccatctgtcaacgcatctacccccaggaaactagcttctactgg
atggcggggttccgtttccagcacattctggtaggctttgtccttcccgggttggtcatc
ctcacctgctactgcatcatcatcgccaagctgtcccaggggtccaagggtcaggtgttg
aagagaaaggctctcaagaccactgtcatcctcgtcctgtgcttcttcatctgctggctg
ccatactgtgtggggatctttgtggacaccctgatgttgctcaatgtgatctcccatagc
tgtgccctggagcagagtctgcagacttggatctcaatcacagaggctctggcatacttt
cactgttgtctcaaccctatcctttatgctttcctgggtgttaaatttaagaaatctgcc
cggaacgcactgactgtcagcagtagatcaagtcataagatactgacaaaaaagagagga
cccatttcatctgtgtctactgaatctgagtcttcaggtgccctgtccagttaa
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