Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380505
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Entry
139380505 CDS
T10872
Name
(RefSeq) toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139380505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ocla04054
]
139380505
04090 CD molecules [BR:
ocla04090
]
139380505
Pattern recognition receptors [BR:
ocla04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
139380505
CD molecules [BR:
ocla04090
]
Proteins
139380505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
TIR
TIR_2
LRR_9
LRR_6
LRR_Zer-1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
139380505
NCBI-ProteinID:
XP_070979312
LinkDB
All DBs
Position
22:17787058..17793260
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AA seq
1009 aa
AA seq
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MPRQFPCDVTVNTTNTTNDIIFNCEERRLKNVPVGITWNVTVLDLSENNIRNVSLDAFSN
LENLTLLNLNCVNKNGDTHIAEGAFKNLTNLQDLRLNGNGLINIPQILPLILDKLMLDNN
KINFSNMSNLVGIQHVKELYLSKNCYYWNPCETDFTIGYGTFSVLTKLKVLMLAYNNLTR
VPKGLPSSIQELHLDSNKIQQIAEDDFLGLSHLTILELQGNCPRCSNAPYPCVPCPNDSL
DIHPHAFHALTQLQTLHLAGNSLRFINNSWFESLNNLTHLFLSYNYLTNTITSGTFFSYL
PKLEKIDLSFNYDLLAYPETLELSKNFSQLVSLTTLHIMGFVFREIHLETLRPLYELKHL
SVLNIGTNFIVRSDSHIFNKFSNSSLKVIYLAENRLYPISVNESPGCGTGGNLKSVWYTS
PLTGYYSNSRDFSYGINHNLVKPECFISGRVLVLSSNNLFFISPKQFEGYGDIACLNLSR
NGFSAALNGTEFTSLPNLKYLDLSFNKIDLAYDNAFKELKKLEILDLSYNSHYFEVSGVT
HNLNFLKNLPTLKVLNMSHNNIFTLTTKQMTSTSLKELQFQHNLLATLWKEGDNSYNSLF
KKLSNLTYLDISFNSIEKIPSKVYENIPYTLQKLCISHNSLCHFDWDKLAGFQQLNFLDL
SYNSLFHVSANLSNFTDTLQILDLSHNRIFQLSRGFLRGAQSLQILDLSYNQLTIINKTT
FLSGPENYMKTLSLQGNPFQCTCDLLEFILWIKYNKNVEIPRLASEVTCNMPAKMRGQPM
ILFNIKECNEDNIAFLIYSLSTSLIMFTVVITMAGHVFYWDASYILYYLRAKLKGYHSLK
STTTDNLYDAFVTYDTRDPLVSDWVLNQLRVQLEERGERHLPLCLEERDWAPGVPLIDNL
FQSIRQSRKTVFVLTEAYIRTGNFRMAVYLAHQRLLDENIDVIVLVLLEPVLQHSHFLLL
RRRLCGRSVLEWPQSAAAETWFWQHLRNAVRLDNQVMYNKIYSRYFTSK
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgccacggcagtttccatgtgacgttacggtcaatactaccaataccacaaatgacatc
atctttaattgtgaggagcgtcgactgaaaaatgtacctgttggcatcacctggaatgtg
accgtgctggacctatcagaaaacaacatcagaaatgtatctcttgatgcattttctaat
ctggagaacctgacccttctcaatctcaactgtgtcaacaaaaatggtgacacacacatc
gctgaaggtgccttcaaaaatctgacaaacctgcaggacctaaggcttaatggcaatggc
ctcatcaacattcctcaaattctcccactcattctggacaaactcatgctggacaataac
aagatcaatttctcgaatatgagcaaccttgtcggtatacaacatgtgaaggagctgtac
ttatccaaaaattgctattactggaatccctgtgagactgactttaccattggatatggc
accttctcagtattgactaagttgaaggttttgatgttggcctataataatttaactcgt
gttccaaaaggactgccaagctctatacaagaattacacctcgattcgaacaagatacag
caaattgctgaggatgatttccttggactaagccatctaacaatcctggaattacaggga
aactgtccacgatgctccaatgctccatatccttgtgttccctgtcctaatgattctctg
gatattcatcctcatgcatttcatgctcttacacagttacagacactgcacctagcaggc
aactcacttcgtttcatcaataactcctggtttgagagcttgaacaatctcacacatctg
ttcctgtcttataattacttaacaaatactatcaccagtggaaccttttttagctatcta
ccaaagctagaaaagattgatttgtcatttaattatgatttgcttgcctaccctgaaacc
ctagagctttcaaaaaacttttcacaattggtgtctcttacaacattacatataatgggt
tttgttttcagggaaattcatttagaaacactcagaccgctttatgaactcaagcatctt
tcagtgttgaacatcggaactaactttattgttcgatctgattcccacatattcaacaaa
ttctcaaactcaagtctcaaagtcatatatcttgcggaaaacaggctttatccaatttca
gtgaatgagtccccaggttgtggcacaggcggcaacttaaagtcggtgtggtacacgtcg
ccactgactggatattattccaattcaagggacttttcttatggaataaatcacaacctt
gtgaagccagaatgctttatctctggtcgagtgctggtccttagttcaaataatctattt
ttcatttctccaaagcaatttgagggctatggtgacattgcatgtctaaacttatcaaga
aatggattttcagcagcattgaacgggacagagttcacctcattaccaaacctaaaatat
ctcgacctgtcctttaacaagattgacctggcctatgacaacgccttcaaggaattaaag
aaactcgaaatattagacctaagttacaacagccactattttgaagtgtctggtgtgaca
cataatttaaattttttgaaaaatctaccgactttgaaagtattgaatatgtcacacaat
aacatttttacattaaccactaagcagatgacaagcacatctttaaaagagcttcaattt
caacacaatttgttggctacattatggaaagagggggataactcatacaacagccttttt
aaaaagctgtcgaatttgacctatctggatatttcatttaacagcattgagaagatccca
tcaaaagtctatgaaaacataccatatacccttcaaaaactatgtattagtcataattca
ctctgccattttgattgggataaactggcaggttttcaacaactgaatttcctggatcta
agctacaattctttatttcatgtgtcagcaaatctctcaaacttcacagacacacttcag
attcttgacttaagccacaatcgaatttttcaactctctcgtggatttctaaggggtgct
caaagccttcagatacttgacctcagctacaaccaactgactatcatcaacaagaccacc
ttcctatcgggccctgaaaactacatgaaaaccttgtccttgcaaggtaatccattccag
tgtacctgtgatttactagagttcatcctgtggataaaatataacaaaaacgtggagatc
cccagactggccagtgaggtgacctgcaacatgccagccaaaatgagaggccaaccaatg
atactgtttaacattaaagaatgcaacgaggacaacatagccttcctgatttactccctc
tccacttccttgatcatgttcactgtggtcatcactatggcagggcatgtgttttattgg
gatgcctcctatattctatactatctgagggcaaagctgaagggctaccattcgttgaag
tcaacaacaacagacaatctctatgatgcctttgttacctacgacaccagagacccgttg
gtgtcagactgggtactgaaccaactgcgggtgcagctggaagagaggggggagagacac
ctgcctctctgtctggaggaacgagactgggcccccggggtccccctaatagacaacctc
ttccagagcattcgacagagccgcaagactgtctttgtgctgaccgaggcttacatcagg
actgggaacttcaggatggctgtgtacctggcccaccagaggttgctggatgagaacata
gatgtgattgtgttggttctcctggaacccgtgctgcagcactctcacttcctccttctg
cggcgccgtctgtgtggaaggagtgttctagagtggccccagtctgcagctgctgagacc
tggttctggcagcacctaaggaacgctgtcaggttagacaaccaggtgatgtacaacaag
atctactccaggtacttcaccagcaagtag
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