Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380704
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Entry
139380704 CDS
T10872
Name
(RefSeq) radixin-like isoform X1
KO
K05762
radixin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139380704
09142 Cell motility
04810 Regulation of actin cytoskeleton
139380704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139380704
04147 Exosome [BR:
ocla04147
]
139380704
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
139380704
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139380704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERM_C
ERM_helical
FERM_M
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
139380704
NCBI-ProteinID:
XP_070979743
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Position
22:complement(27183393..27218738)
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AA seq
572 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYTDSKGYSTWLK
LNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDENYCPPE
TAVLLASYSVQAKYADYSRDVHKPGYLTSDRLLPQRVLEQHKLTKEQWEDRIQTWHEEHT
GMLREDSVMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHEDKLTPKIGF
PWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHHKQMERAQLENEKKKRAHAEKEREKMEKEKDELIQRLRQIEEQTLK
AQKELEDQTRRALELDQERKRAKEEAERLEKEKQAAEEAKAELVKQAADQMKNQEQLAAE
LGEFTAKIALLEEAKRKKEEEATEWQHKAISAQEDLEKTKEELKSVMSSPPAPEHDEQDE
TNAEGSTELHSDGVTSHHSEEERVTEAQKNERVKEQLQALSSELAQARDDTKKTQNDMLH
AENVKAGRDKYKTLRQIRQGNTKQRIDEFESM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaccgatcaatgtgcgtgtcaccaccatggatgcagagctggagtttgccatc
cagcccaacaccaccggcaaacagctctttgaccaggtggtgaagacagtgggcctccgg
gaggtgtggttctttggcctgcagtacacagacagtaaaggttacagcacgtggctcaaa
ctcaataagaaggtgacacagcaggatgtgaagaaggagaaccctctgcagttcaagttc
agagccaagttcttccctgaggacgtgtctgaagaactcatccaggagatcacgcagaga
ctcttcttcctgcaggtgaaggaggccatcctgaacgatgagaactactgtcctccagag
acagccgtgttgctggcctcctactctgtccaggccaagtatgcagactacagcagagac
gtccacaagcctggttacctcacctccgaccgcctgctgccacagagagtgctggagcag
cacaagttgactaaggaacagtgggaggacagaatacagacctggcatgaggaacacaca
ggcatgctcagagaggactctgtgatggagtatctgaagatagcccaggacctggaaatg
tatggagtcaactactttgagatcaagaacaagaagggaaccgagttgtggctgggtgtg
gatgcactgggactcaatatctacgaacatgaggacaagttgacaccaaagattggcttc
ccctggagtgagatcagaaacatctccttcaacgacaagaagtttgtcatcaaacccatc
gacaagaaagccccagactttgtattctacgcaccacggttgcggattaacaagcgtatc
ctggcgctgtgcatggggaaccacgagctgtacatgaggaggaggaagcctgataccatc
gaggtgcagcagatgaaagcccaggcccgggaggagaaacaccacaaacagatggagcga
gcccagctagaaaacgagaagaaaaaacgagcgcacgcagagaaagagagggagaagatg
gagaaagagaaggatgagctgatccagagactcagacagattgaggaacagacgctaaag
gcccagaaagagctggaggatcagacacgcagggccctggagttggaccaggagaggaag
agagcgaaggaagaggcagagaggttggagaaagagaaacaggcagcagaggaggccaaa
gcagagctggttaaacaggctgctgaccagatgaagaaccaggaacaactggccgctgag
ctaggagaattcaccgccaaaatcgctctgcttgaagaggccaaaaggaaaaaggaagag
gaagcgacagaatggcaacacaaagccatctcagcccaggaggacctggagaagactaaa
gaggagctgaagtctgtgatgtcatcacccccggcgccagagcacgatgagcaggatgag
acgaatgctgagggtagcaccgagctgcacagtgatggggtcaccagccaccacagcgag
gaggaacgtgtcacagaggcccagaagaacgaacgcgtcaaggaacagctgcaggctctg
agttcagagttggcccaggcgagggacgacaccaagaagacccagaatgacatgctacat
gcggagaacgtgaaggctgggagggacaagtacaagaccctgcgtcagatccgccaggga
aacaccaagcagcgcatcgacgagtttgagtccatgtga
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