Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380830
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Entry
139380830 CDS
T10872
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
139380830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139380830
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
139380830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
139380830
NCBI-ProteinID:
XP_070980021
LinkDB
All DBs
Position
22:36278131..36383849
Genome browser
AA seq
1503 aa
AA seq
DB search
METSALTATEKKEHTGSGLGGGSFSDLPKKPSPTTVTRGPHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHTMHGPQGLASSPVISDCISLIRLSPQAAGTGESPFSPPHPYINHHMEHYL
RSMHSSPTLSMISAARGLSPAEVTHEHLKERGLFSLPPPPPGANPTQYYHLMASGRSTYG
DLLLQTGAAAAAAAAAAHLPDYISPVDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASSSYGHLSVSGISPSFTFPHSINPMAYQQLFNQQRGLS
AFGHTPPLIQPSPSFAARQHAHAIAASALNTTHNTSSSESNQNAGSDPAVSSTVNPMITK
RHKVKTEAEGPRSISPCSQEHVLDLSEERDKDEWKQEPEAVYETNCHWDGCTKEYDTQDQ
LVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKA
YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTK
RYTDPSSLRKHVKTVHGPEAHVTKKQRGDVPPRGPPKGNGENEANAKQSDRGIDGKMEAN
SITRGVEDCLQVKSIKTENSMTYQSSPGGHSSCSSEPSPLGSAHNNDSGVEMALHSRGSF
GELSALDDAPMVDSSTLSHGNSAGVGLGLRKGGGVTIKLENIKKERLKNVRDSCPWANSG
PQIRNTNTKLPPIPAVGSLLENSNMIASPGPYPGQRLGDLSSCEATMLNQLNEQGRRYSN
TSTASSAYTSRRSSGISPCYSSRRSSEASQFSNRHNNISSADSYDPISTDLSRRSSEASQ
CGGGGGNGPSLLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLSTRMALYGDHSQER
ETSSNSNLFQPPAGAVPRRCSDIGYSNHSMMPHEVPGNLPRRASDPVRRPTLDPLSLPRV
QRYNSMNSMNPNSMMPPPSTDRRGLAMQGYTRSDGSLHRHPFTPRPPSISENVVMETMAV
DGLDHAGDEDMVLPDDVVQYLRSQNTGAGQSAGPVDYTNSQSHGFQVQGNMTSSQQPQQQ
FYGQRRMAMVDTNMPLSESGQAPLTLYKMSPGSGSQQQQYPTSPRMNNKNNMPVQWNEVS
SGTVDATGTSRLTKQNLLRNNNLAVVQQRQNCGPFQGSMGSNSHQQVMPMSQNMELQGYT
QRSNAQRINSVQQQQRQPCSMNYTEQMSPQQGYGQDIVPIPNSGSGNGSLRPNYNGMALP
NGRVMATHNPDIQNYRSRTQVESYPPHMNQVEQLNYSSTPQQQAVHTGTRDGMQPRLSRQ
HVRSSSTMQNRFLQSDLNHNTSEASPKKPGRTAAHNVGQKGNSNSNAPMLYTGQIHMFES
NNNLSFDSPMSPCTPQALVGTAVTMVSPGVNQVTSTVDSSGVEHAQIDFDAMLDDGDHSS
LMSGTLSPGLLTSLSQNSSRLTTPRSSVTLASVPAGIGNMAIGDMNSMLTALAEESKFLN
MMS
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgcccttacagccactgagaagaaggagcacacaggatcaggtctgggt
ggaggcagcttctcagacctgccaaagaaaccgtctcctactacagttaccagaggtcct
caccatctcttccccacgtttcacacaccaatcccgatcgacatgcgtcaccatgagggg
aggtaccattacgagccacaccccctccacaccatgcatggacctcaaggcctagccagc
agcccagtcatctcagactgcatctctctgatccgtctgtcccctcaggcagcagggacg
ggggagtcccccttcagcccccctcacccctacatcaaccaccacatggagcactacctc
cgctccatgcacagcagccctaccctatccatgatttcagctgcccgtggactcagcccc
gcagaagtgacccatgagcacctgaaggagcgtggtctgttcagcctgccccctccccct
ccaggggccaaccctacacagtactaccacctcatggccagtggcagaagcacctacgga
gacctcctcttgcagaccggggcggccgcggcagcagcagccgcagcagcacacctgccc
gactacatcagccctgtggacgtgtccaggttctccagccccagactgacccccaggctg
aacaggaagcgagccctgtccatctcccctctctcagacgccagcatcgacctgcagacc
atgatccgtacctcgcccaactctctggtggcttacatcaacaactcacgctccagctct
gcagccagcagctcctacggacacctgtcagtcagcggcatcagtccttcgttcaccttc
ccccactccatcaaccccatggcataccagcagctgttcaaccaacagagaggcctgagt
gcgttcggccatacccctcccctcatccagccctcgccctccttcgctgcccgccagcat
gcccacgccattgcagcctccgccctcaacaccacccacaacacttccagctccgagtcc
aaccagaatgctggtagcgacccggcggtgagcagcacagtcaaccccatgatcaccaag
aggcacaaggtcaagacagaagcagagggaccccggtccatatcaccgtgctctcaggag
catgttctggacctgagtgaggagcgggataaagatgagtggaagcaggagccagaggct
gtctacgagaccaactgtcactgggacggctgcaccaaggagtacgacactcaggaccag
ctcgttcaccacatcaacaacgaccacatccatggggagaagaaagagtttgtgtgccgt
tgggatgagtgctcgagagaacagaagcccttcaaagctcagtacatgctggtggtccac
atgaggagacacactggggagaagccacacaaatgcacatttgaaggttgctgtaaggcc
tactctcgcctggagaacctgaagacccacctgaggtcccacacaggggagaagccgtac
gtctgtgaacatgagggctgcaacaaagccttctcaaacgcctcagacagagccaagcac
cagaaccgcacacactccaatgagaaaccctacatctgtaagatccctgggtgcactaaa
cgctacacagaccccagctctctcaggaagcatgtgaagacggttcacggaccagaggcc
cacgtcaccaagaaacaacgtggcgatgtgcctcccaggggtcctcccaagggaaatgga
gagaatgaggcaaatgccaaacagagtgatagagggatagatggaaagatggaggccaac
agcattactagaggagtggaggactgcctgcaggtcaagtcaatcaagaccgagaactca
atgacgtatcaatccagccctggcggtcactcgtcatgtagcagtgagccatcgccactt
ggcagtgcccacaacaatgacagtggagtagagatggccctgcacagcaggggaagcttt
ggggagctgagtgcactggatgacgctcccatggtggactcctccaccctctcccacggc
aactcggcaggggtggggcttgggctccgtaaagggggaggagtcaccatcaagctggag
aacatcaagaaggagaggctgaagaatgtgagggattcgtgtccctgggccaactctggt
ccacagatccggaacaccaacaccaagctgcctcctattcctgctgttggttcccttctg
gagaactccaatatgatcgcttcacccgggccataccctggtcagcgtcttggtgacctg
tcatcatgcgaggcgaccatgctaaaccagctgaatgagcagggccgccggtacagcaac
accagcactgccagttcagcctacaccagccgccgctcctcgggcatctccccctgctac
tccagccgccgctcttccgaagcttcgcagttcagcaaccgccacaacaacatcagttca
gccgactcctacgaccccatctccacagacctgtcccggagatccagcgaggccagccag
tgtggagggggtggtggaaacggccctagtttgctcagcctcaccccggctcagcactac
catcttaaggccaagtatgctgccgcaaccgggggagctccacccacacctctgcccaac
atggagcgcatgagcctcagtactaggatggccctgtacggggaccactcccaggagagg
gagacctcctccaattccaacctgttccagccccctgctggagcagtgcccagacgctgc
agcgacattggctacagtaaccatagtatgatgccccatgaggtccctggtaacctgcca
cggcgagccagcgatcccgtccgcagacctaccttggacccactgtccctgcccagggtc
cagcgctacaacagcatgaacagtatgaaccccaactccatgatgcctcctccctctact
gatcgccggggcctggccatgcagggctacacacgatccgacggaagtctgcaccgccac
cctttcaccccgcggccccccagcatctcagagaatgtggtgatggagaccatggcagtg
gacgggctggaccatgcaggggacgaggacatggtgctgcctgatgatgtcgtacagtat
ctcaggtctcagaacactggcgccggccaatcagcaggccccgtcgactacaccaacagc
caatcacacggcttccaggtccaagggaatatgacctcctcccagcagccccagcagcag
ttctatgggcaaaggaggatggccatggtggataccaacatgcccctgtctgagtcaggc
caggcccccctaacgctctacaagatgagccctggttctggatcacagcaacagcagtac
ccaacctcaccccgtatgaacaacaaaaacaacatgccagtgcagtggaatgaggtcagc
tcagggactgtggacgccacaggcacctcaagactcaccaagcagaacctcctcagaaac
aacaacctggcagtggttcagcagagacagaactgtgggcctttccagggtagtatgggt
agtaacagtcaccagcaggtgatgcctatgagccagaacatggagctacaaggctacact
caaagaagcaacgcccaaaggatcaactctgtccaacagcaacagaggcagccatgcagc
atgaattatactgagcagatgagtccccagcagggatacggccaagacattgtccccatc
cctaactctggatctgggaatggcagcctacgacccaactacaacggcatggcactgccc
aatggcagagtaatggcaacacataatccagatattcaaaactacagatcaaggactcag
gttgaaagctatccccctcacatgaatcaggttgagcagctgaactacagtagtacgcct
cagcagcaagccgtccatactgggaccagagatgggatgcagcccaggctgtccagacaa
catgtaagatccagcagtacgatgcagaaccgtttccttcagtctgacttgaatcacaac
acctctgaggccagtccaaagaagccaggccgcaccgcagcacataacgtgggacaaaag
ggaaactccaactctaacgctccaatgttatacactggccagatacacatgtttgagtcc
aacaacaacctgagtttcgactcccccatgtccccctgcacaccccaggcactggtaggc
actgccgttaccatggtatccccaggggtcaaccaggtcaccagcaccgtggactcctct
ggtgtggagcacgcccagattgactttgatgccatgttggatgatggtgaccactccagc
ctgatgtcggggaccctcagccccgggctcctcacaagtctgtcccagaactcctccagg
ctcaccaccccccgtagctctgtgaccctggcctctgtgccagcagggatcggtaacatg
gccatcggcgatatgaactccatgttgaccgccctggctgaggagagtaagttcctcaac
atgatgagctaa
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