Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381011
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Entry
139381011 CDS
T10872
Name
(RefSeq) peroxisomal bifunctional enzyme
KO
K07514
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase [EC:
4.2.1.17
1.1.1.35
5.3.3.8
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00071
Fatty acid degradation
ocla00280
Valine, leucine and isoleucine degradation
ocla00310
Lysine degradation
ocla00380
Tryptophan metabolism
ocla00410
beta-Alanine metabolism
ocla00640
Propanoate metabolism
ocla00650
Butanoate metabolism
ocla01100
Metabolic pathways
ocla01212
Fatty acid metabolism
ocla03320
PPAR signaling pathway
ocla04146
Peroxisome
Module
ocla_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
ocla_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
139381011
00650 Butanoate metabolism
139381011
09103 Lipid metabolism
00071 Fatty acid degradation
139381011
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
139381011
00310 Lysine degradation
139381011
00380 Tryptophan metabolism
139381011
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
139381011
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139381011
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
139381011
Enzymes [BR:
ocla01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
139381011
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
139381011
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
139381011
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
TrkA_N
F420_oxidored
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-GeneID:
139381011
NCBI-ProteinID:
XP_070980341
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All DBs
Position
22:51890136..51939142
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AA seq
718 aa
AA seq
DB search
MATYSRLPGSVALITLQNPPVNALSAAVRQGIVDTVQRALKDPKVTSVVICGQNGKFCGG
ADIREFAGPMLGPPLVPMIHAIEAVDKPVAAAIEGVALGGGLELALGCHYRIAHSKALLG
LPEVTLGLLPGAGGSQRLPRLIGLTAALDLITTGRHISAAEALKLGILDQVTDNNVVDQA
VEFVRSVAGQPLDSRRLSTLPCPCPPDVDSLLDKAMVKVRQRSRGALAPVACVQALMAAA
SLPYTQGMEKERDLLTTLFNSGQARALQYAFFSQRVVGKWSLPSGASWDNSAARTISKAA
VIGLGTMGRGIVVALALTGISVVAVETQEKQLAEASQAVPAMLQREAGRRSLATPPGVIS
FSSNLQDVSEVELVIEAVFEDMSLKLQVFRHLTSVCRPGTLLCSNTSGLDIDQLAAVTQS
PGLVVGMHFFAPAHVMKLLEVVYGPRSSPEAVATAMQLGKRMGKVSVAVGNCPGFVGNRM
LKPYLEQANFLLEEGATPQQVDEALEEFGFPMGVFRMSDLSGLDVGWRIRKEAGLTGPGV
ESTRTRQGRRYSPLPDQVCEAGRLGQKTGRGWYQYDGPGGRVARSDPWVHIFLEAYRAEH
GLVARSIAPEEILERCLYALINEGFNILQDAMAAGPEDIDAIYVFGYGWPRHHGGPMFHA
GQVGLGRILERLQHHHHNHPDVPHLKPSTLLRRLVAVGSPPVQKWREFINKERVHSQL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtactctcggctcccgggatccgttgctctgataacgcttcagaatccacct
gtcaacgcgctcagtgcagcggtgcgacagggcatagtagatacggtgcagagggccctg
aaggacccaaaggtgacatctgtagtgatctgtggacagaatgggaagttctgtggaggg
gcagacatcagggagtttgcggggccgatgttggggccccccctggtgcccatgatccat
gctattgaggctgtggacaagcctgtggcggcagccatcgagggagtagcactgggagga
ggactggagttagccctgggctgccactatcgcattgcacactccaaggcccttctagga
cttccagaggtgaccctgggtctgctgccaggcgcaggagggtcacaacgtctacccaga
ctcatagggttaacagccgccctggacctcatcactacaggtcgccatatctctgctgct
gaggccctgaagctggggatcctagatcaggttaccgataacaacgttgtggaccaggcc
gtggagttcgtccggagcgttgcaggccagcccctggactcccgtcgtctgagcaccctg
ccctgcccctgccccccagacgttgactccctcttggacaaagccatggtcaaggtccgg
cagcgctcccgaggtgccctggctccggtggcctgtgttcaggctctgatggcggctgcc
tccctaccttacacccagggtatggagaaggagagggacctgctgaccaccctgttcaac
agtggtcaggcccgagctctgcagtatgccttcttctcccagagggtggtggggaagtgg
agtctgcctagtggggcgagctgggacaacagcgctgccaggaccatcagcaaagctgct
gttattggtctgggtaccatggggcgtggcatcgttgtggcactggctctgacgggcatc
tctgtggttgccgtggagacccaagagaagcagctggcagaggccagtcaggcagttccg
gcgatgctgcagagagaggcggggcgacgaagcttggccacacccccaggggttatctcc
ttcagctctaacttgcaggacgttagtgaggtggagttggtgatcgaggcggtgtttgag
gacatgtccctgaagctgcaggtgtttaggcatctgacctctgtgtgtagacctgggacc
ctgctctgctccaacacctctggcttggacatcgaccagctagctgccgtcacccagagc
cctggcctggtggtggggatgcacttctttgctccggcccacgtcatgaagctgctggag
gtggtgtatggtccacggtcatctccggaggcagtcgccacggcaatgcagctgggcaag
aggatggggaaagtcagcgtcgccgtgggcaactgtccggggtttgtgggtaaccggatg
ttgaagccatacctggaacaggccaacttcctgttggaggaaggagccacgccccagcag
gtagacgaggcgctggaggagtttggattccccatgggcgtgttccggatgtctgaccta
tcagggctggatgtgggctggaggatcaggaaggaggcggggcttacagggccaggggtg
gagtcaaccaggacacgccagggccgacggtacagcccgctacctgaccaggtgtgtgag
gcaggccggctgggccagaagacggggaggggatggtaccagtatgacgggcctggaggc
agggtggcgcggtccgacccctgggtgcacatcttcctggaggcttacagggcggagcac
ggcctggtggcccgaagcatcgccccggaggagatcctagaacgctgtctctacgctctg
atcaatgaaggcttcaacatcctgcaggatgccatggccgccgggccggaagacatcgac
gccatctatgtgtttgggtacggctggccccggcaccacgggggacccatgttccatgca
ggccaggtgggattgggcaggatcctggagaggctgcagcaccaccaccacaaccaccct
gacgtgcctcatctgaagcccagtacgctgctgcggaggctggtcgcagtgggaagtcct
ccggtccagaagtggagagagttcatcaacaaagaaagagtccacagtcagctctga
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