Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381383
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Entry
139381383 CDS
T10872
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139381383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139381383
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
139381383
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
139381383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
139381383
NCBI-ProteinID:
XP_070980972
LinkDB
All DBs
Position
2:49679856..49690722
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AA seq
436 aa
AA seq
DB search
MEEKQYTSLTVPTDYLQQWYQSTQQHPQAQHVMQYHNTGHMGHYMEGSREDRVMTELSVH
QELPVHQELDFHHDFLGHQEPIVQHHQPVDTSQAPMPGKRKRGRPPKQKPGEGQPQEEHD
QAEALKKAKRTLNRFNGMSVDEVMAKTLPDIIDHNLDILIIGINPGLLSAYKGRHYPNPG
NHFWKCLFLSGLTDEQLNHMHDRNLPEKYGIGFTNMVERTTPGSKDLSSKEFREGGHQLV
EKLKKYKPLIAAFNGKCIYEIFSKEIFGVKAKKLEFGLQPYTIPETETVCYLMPSSSPRC
AQFPRAQDKVHFYIKLKELRDKIKGVAPVAREVQETEYHFDLGLAKEDAKRMAIKEEQVD
PEYENCGGASQDAKQSTSYCNISSTKETGMPSKDQATAMSHMPYDQWMTQSFADQIPDIS
CNSSNVPQPQLGAETF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagcagtatacgtcactgacggttcctacggattatctccaacagtggtac
cagtccacccagcagcacccccaagctcaacatgtgatgcagtaccataacacaggtcat
atgggccattacatggagggatccagagaggaccgggtcatgacagagttgtcggtccac
caggagctcccagtccaccaagagctggacttccatcatgacttcctcggccatcaagag
ccaattgtccaacatcatcagcctgtggatacatcacaagctccaatgccagggaagaga
aagagaggtaggcctcccaaacagaagccgggggagggccaaccgcaggaggaacacgat
caggcagaagctctgaagaaagccaaaaggacccttaaccgcttcaatggcatgtcagtg
gatgaggtcatggccaaaaccctgccagacattattgaccacaacctcgacattttgata
attggtatcaatccaggactattgtcagcctacaagggacgacattacccaaacccagga
aatcatttttggaaatgcctgttcctctctggtctaactgatgagcaactcaaccacatg
cacgatcgaaacttaccggagaagtatggcattggctttaccaacatggtggagaggaca
acgccaggaagcaaagacctctcaagcaaagagtttcgtgaaggaggccatcaattggta
gagaagctgaagaaatacaagccgctaattgcagctttcaatggaaaatgtatttacgaa
attttcagcaaagagatctttggagtgaaggcaaagaaactcgagttcggtttacagccg
tacacaatcccagaaaccgaaacggtgtgctacttgatgccctcgtcaagcccccgctgt
gcccagttcccccgcgctcaggacaaggttcacttctacatcaagctgaaggagctacgg
gacaagatcaagggtgtggccccagtcgcccgtgaggtgcaagagacagagtaccacttc
gacttgggacttgccaaagaagatgctaagaggatggccatcaaggaagagcaggtggat
ccagagtacgagaactgcggtggggcgtcccaggatgcaaagcaaagcaccagctactgc
aacatttcctccaccaaagagactggaatgcccagtaaggaccaagctacagcaatgagc
cacatgccatacgaccagtggatgacacagtcgtttgcggaccagataccggacattagc
tgtaacagtagcaatgtacctcaacctcagttgggagcagaaaccttttga
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