KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139381618
Entry
139381618         CDS       T10872                                 
Name
(RefSeq) LOW QUALITY PROTEIN: methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00270  Cysteine and methionine metabolism
ocla00450  Selenocompound metabolism
ocla00670  One carbon pool by folate
ocla01100  Metabolic pathways
ocla01230  Biosynthesis of amino acids
ocla04980  Cobalamin transport and metabolism
ocla04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    139381618
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    139381618
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    139381618
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    139381618
   04980 Cobalamin transport and metabolism
    139381618
Enzymes [BR:ocla01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     139381618
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding CdhD MtrH
Other DBs
NCBI-GeneID: 139381618
NCBI-ProteinID: XP_070981384
LinkDB
Position
23:60438628..60489283
AA seq 1268 aa
MAPTIYESSTTKGSGPSRPALEAELRELLRKRIMILDGGMGTMIQERRLEEEHFRGEEFK
DHTHSLKGNNDLLSITQSDVIYNIHKEYLLAGADIIETNTFSSTCIAQADYGLGHLAYRM
NKVSAEIARKAADDITNQTGCKRYVAGAVGPTNKTLSVSPSVERPDFRNVTFDELAEAYA
EQVRGLLDGGADIIMVETIFDTANAKAALFAIDKLFEESYEPRPIFISGTIVDRSGRTLS
GQTGEAFVISVSHAKPLCIGLNCALGATEMRPFIQAIGKCTTAHILCYPNAGLPNTFGGY
DETPELTASHLKDFATDGLVNLVGGCCGTTPAHIRAIAEKVKHCHPRVPPTDVFQDYMLL
AGLEPFRIGPYTNFVNIGERCNVAGSRKFAKLIMSGNYEEALSIAKTQVEMGAQVLDINM
DEGMLEGPAAMARFCCLISSEPDIARVPLCIDSSNFEVIKAGLKCCQGKCIVNSISLKEG
EEEFLQRATTVRRYGAAVVVMAFDEEGQATETERKVDICSRAYRLLVTQVGFDPNDIIFD
PNILTIGTGMEEHSEYAINFIRATRLIKELLPGARISGGLSNLSFSFRGMEVIREAMHGA
FLYHAIKDGMDMGIVNAGSLPVYDDIDKELLLMCENLIWNKDPEATEKLLLYAQSCAKGG
KKVVQTDEWREGTVEERLEYGLIKGIDKYVVEDTEEARSQAELXPRPLHVIEGPLMNGMK
VVGDLFGAGKMFLPQVIKSARVMKKAVAHLIPFMEKEREAMLLESGSVEEIDPYQGTIVL
ATVKGDVHDIGKNIVGVVLGCNNFRVIDLGVMIPCDRILREAIDCKADIIGLSGLITPSL
DEMIYVAKEMERLGMKTPLLIGGATTSKTHTAVKIAPRYSCPVVHVLDASRSVVVCSQLL
DENVKEEFFEETTEEYEDIRQDHYDSLKERRFLSLAQAREKGLHVDWLSQTKPVCPQFLG
TRVFEGYDLRRLVDYIDWKPFFDVWQLRGKYPNRGYPKIFKDKTVGEEARRVFDDAQRLL
NRLIDNKGLWGRGLVGFWPAQSVGDDIQVYEHDVTPRSTTPLATFYGLRQQAEKDSASSD
PYYCLSDFVAPRASRVSDYMGMFAVAVFGAEELSKQFETQGDDYNSIMVKALADRLAEAF
AEELHARVRRELWGYSVEENLPTEDMHRIRYEGIRPAAGYPSQPDHTEKTAMWTLGEVEE
KTGIKLTESLAMTPAAAVSGLYFSHPKATYFAVGKITREQVEDYAGRKEMPVSEVERWLG
PILGYDTD
NT seq 3807 nt   +upstreamnt  +downstreamnt
atggctcctacaatatatgagagttcgacaacaaaaggtagtggccctagcagacctgcc
ctagaggctgagctcagggagctgttgaggaagaggatcatgatactagatggagggatg
ggcaccatgatccaggagaggcgattggaggaggaacacttcaggggggaagagtttaaa
gaccacacccacagcctgaagggcaacaacgacctgctgagcatcacacagagtgatgtc
atctacaacatacacaaggaatacctgctggctggggcagacatcattgagaccaacact
ttcagtagcacctgtatcgcccaggccgactacggactgggacacttggcttatcgtatg
aacaaggtgtcagcagaaatagccaggaaagcagcagatgacatcaccaaccagacaggt
tgtaagagatacgtggcgggcgccgtgggccccaccaataaaaccctgtctgtgtctccc
tcagtggaaagaccagacttcaggaacgtcacctttgatgagctggctgaggcctacgcc
gagcaggtccggggtctgttggatggaggagcggatattatcatggtggagaccatcttt
gacacggccaacgccaaggcagcactgtttgctatcgacaaactgtttgaagagagctac
gaacccagacctatatttatatcaggcaccatcgtggacaggagtggtcgtactctctca
ggacagacaggagaggctttcgtcatcagtgtgtcccatgccaaacccctctgtattggt
cttaactgtgccttaggagccactgagatgaggccttttattcaggctattgggaaatgc
accacggctcacatcttatgctaccccaatgcaggtctgcccaatacgttcggtggatac
gatgagaccccggagttgacagcctcacatttaaaggactttgctacagatggtctggtg
aatctggttggtggatgctgtggaacgactcctgcacacatcagggccattgctgagaaa
gtgaagcactgccatcccagagtgccccctactgacgtctttcaggactacatgctactc
gcaggtctggagccattcaggatcggtccgtacactaatttcgtcaacatcggcgagcgg
tgcaacgtggctggatcaaggaagttcgccaagctgatcatgtcgggaaactacgaggag
gcgttgagcatagccaagacccaggtggagatgggagcccaggtgttggacatcaacatg
gacgaggggatgttggagggtcctgccgccatggcccggttctgctgtctcatatcctcc
gagcctgacatcgccagggtacctctgtgtatagactcgtcgaacttcgaggtgatcaag
gcggggctgaagtgttgtcaggggaagtgtatcgtgaacagcatcagtctgaaggaagga
gaagaggagtttctccagagggctacgactgtcagacgctacggggctgctgtggtggtt
atggccttcgacgaggagggtcaggctaccgagacagagcgcaaggtcgacatctgcagc
agagcctatcgcctcctggtaactcaagtgggctttgaccccaacgacatcatctttgac
cccaacatcctgaccatcggcacgggcatggaggaacacagcgagtacgccatcaacttc
atcagagccaccaggctcattaaggagttgttgcctggggccaggatcagtggaggcctg
tccaacctgtccttctccttcagaggcatggaggtcatcagagaggccatgcatggagcc
ttcctctaccacgccatcaaggacggtatggacatgggcatagtgaacgctggcagcctg
cctgtctatgatgatatcgacaaggagctcctgctcatgtgtgagaaccttatctggaac
aaagacccggaggccacagagaaactactgctgtacgcacagagctgtgccaaaggaggg
aagaaggtggtccagacggatgagtggcgagagggaacagtggaggagaggctggagtat
gggctcatcaagggtatagataagtatgtggtagaggacacagaggaggcgaggtcccag
gctgagctctagccgaggcccctacacgtcatcgaggggcccctgatgaacggcatgaag
gtggtgggagacctgtttggtgctgggaagatgttcctacctcaggtgataaagtcagca
cgtgtgatgaagaaggctgtcgcccacctgatccccttcatggagaaggagagagaggcc
atgctactggaatcaggatcagtagaggagattgacccctaccagggcaccatagttttg
gccacagtgaagggagacgtccacgacatcggaaagaacattgtaggagtggtgctgggc
tgcaacaacttcagagtgatcgatctgggggtcatgattccatgcgacaggatattaagg
gaagccatcgactgcaaagcagacatcatcggtctgtctggcctcatcacgccctcgctg
gatgagatgatctacgttgccaaggagatggagcggcttgggatgaagaccccactgctg
atcggaggggccaccacctccaagacccacacggcagtgaagatcgctccccgttacagc
tgtcctgtggtgcatgttctggatgcttccaggagtgtggtggtgtgttcccagctgcta
gatgagaatgtgaaggaggagttctttgaggagacgacagaggagtacgaagacatcaga
caggaccactatgactctctaaaggagaggcgcttcctgtctctagcccaggccagggag
aaaggactccatgtggattggctttctcagaccaaaccagtgtgtcctcagttcctgggt
acccgtgtgtttgaggggtatgacctgcggaggctggtggactatatcgactggaagcct
ttctttgacgtgtggcagctgagagggaagtaccctaacagggggtaccccaagatcttc
aaggacaaaaccgtgggtgaggaggctcggagggtgtttgacgacgcccagcggctcctc
aacagactgatagataataagggtctctgggggcgtggcctggtgggcttctggcccgcc
cagagtgtaggagacgacatccaggtgtacgaacatgacgtcacacctcgctccaccacg
cccctcgccaccttctacggactacgccaacaggcagagaaggacagtgccagctcagac
ccctactactgcctgtccgacttcgtggccccgagggccagccgtgtgtctgactacatg
ggaatgtttgctgtagctgtgttcggagcggaggagctgagcaaacagtttgagacccag
ggagacgactacaacagtatcatggtgaaggctctggctgatcgcctggctgaggcgttt
gccgaggagctccacgccagggtgcgtagagagctgtggggctacagcgtggaggagaac
ctcccgactgaggacatgcacaggatacgttacgagggcatcaggccagccgcaggatac
ccctcccagcccgaccacactgagaagaccgccatgtggacgctgggcgaggtagaggag
aagacgggtatcaagttgactgagtctctggccatgaccccagcagctgctgtctctggg
ctgtacttctctcaccctaaagctacctacttcgcagtgggaaagatcaccagagaacag
gtggaggactatgctgggaggaaagagatgccagtgtctgaggtggaacgctggctggga
ccaatcctgggctacgacactgactga

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