Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382016
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Entry
139382016 CDS
T10872
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03008
Ribosome biogenesis in eukaryotes
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139382016
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139382016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139382016
03009 Ribosome biogenesis [BR:
ocla03009
]
139382016
Spliceosome [BR:
ocla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139382016
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
139382016
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
139382016
NCBI-ProteinID:
XP_070982032
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Position
23:complement(38978599..38985836)
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AA seq
128 aa
AA seq
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MTEAEVNPKAYPLADATLSKTILDLVQQASNYKQLRKGANEATKTLNRGISEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQIQSTQ
MAIERLLV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagctgaagtgaatcccaaggcctaccccctggccgacgccacactgtccaaa
accatcctggacctcgttcagcaagcctccaactacaaacagttgaggaaaggggccaat
gaggccaccaagacattgaaccgtggtatttccgagtttattgtgatggctgctgatgct
gagccactggagatcatcctccacctgccactgctctgcgaggacaagaatgtcccctac
gtgtttgtgcgatccaagcaggccctggggcgcgcctgtggggtctcccgcccggtcatc
gccacctcggtcaccatcaaggagggttctcagctgaagccccagatccagtctacccag
atggccattgagagactgctggtctga
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