KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382739
Entry
139382739         CDS       T10872                                 
Name
(RefSeq) transforming growth factor, beta 1a
  KO
K13375  transforming growth factor beta-1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010  MAPK signaling pathway
ocla04060  Cytokine-cytokine receptor interaction
ocla04068  FoxO signaling pathway
ocla04110  Cell cycle
ocla04148  Efferocytosis
ocla04218  Cellular senescence
ocla04350  TGF-beta signaling pathway
ocla04518  Integrin signaling
ocla04672  Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    139382739
   04350 TGF-beta signaling pathway
    139382739
   04068 FoxO signaling pathway
    139382739
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    139382739
   04518 Integrin signaling
    139382739
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    139382739
  09143 Cell growth and death
   04110 Cell cycle
    139382739
   04218 Cellular senescence
    139382739
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    139382739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ocla03110]
    139382739
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocla04052]
    139382739
   00536 Glycosaminoglycan binding proteins [BR:ocla00536]
    139382739
Chaperones and folding catalysts [BR:ocla03110]
 Intramolecular chaperones
  Others
   139382739
Cytokines and neuropeptides [BR:ocla04052]
 Cytokines
  Transforming growth factors (RSTK binding)
   139382739
Glycosaminoglycan binding proteins [BR:ocla00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   139382739
SSDB
Motif
Pfam: TGFb_propeptide TGF_beta DUF2199 Disaggr_repeat RIN1
Other DBs
NCBI-GeneID: 139382739
NCBI-ProteinID: XP_070982955
LinkDB
Position
24:complement(42523375..42560449)
AA seq 384 aa
MRLVCLVLTCLAALCLAGSVSSMSTCKTLDLELVKKKRIEAIRGQILSKLRMPKEPEEEQ
AGAGKEIPVALLSLYNSTVELSEEQKLQPQPTTHTLDEEEEYFAKEVHKFTMKQDKNVTK
HQMLFNLNEMRSSIGDYHLLSSAELRLLIKTTNIPSGSEQRLELYKGLGDSRRYLGSRFV
TNKWSDRWLSFDVTETLKEWLKGTEEEQGFELKLYCECGKPMEKFLFSISGLDSGVRGDV
AGLAKNMRKPHILAMSIPQNYSSQLTSSRKKRAVATDDTCTDKTENCCVRKLYIDFRKDL
GWKWIHQPKGYHANYCMGSCTYIWNAENKYSQILALYKHHNPGASAQPCCVPQVLEPLPI
LYYVGRQHKVEQLSNMIVESCKCS
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgagactggtgtgtttggtccttacgtgcctggcggcgctgtgcttggcgggcagcgtg
agcagcatgtccacctgtaagactctagacctggagctggttaagaagaaacgcatcgag
gccatcaggggacagatcctctccaagctgaggatgcccaaggagccggaggaggagcag
gcgggagcagggaaggagatccctgtagcgttgctctctctctacaacagcaccgtggag
ctcagtgaggagcagaaactacagccacagcccactacacacacactggatgaagaggag
gagtacttcgccaaggaggtccacaagttcaccatgaagcaggataagaatgtcaccaag
caccagatgctgtttaacctgaatgagatgaggtccagcattggggactaccatctactc
tccagcgctgagctccgcctgctcatcaaaaccactaacatcccgtctggcagtgagcag
cgcctggagctctacaaggggctgggcgacagcagacgatacctgggatcacgcttcgtc
accaacaagtggagtgaccgctggctgtctttcgacgtcactgaaaccctcaaggaatgg
ctgaaggggaccgaggaagagcagggctttgagttgaagctgtactgtgagtgtggtaaa
cccatggaaaagttcctcttcagtatctccgggttggacagcggggtacgaggtgacgtg
gctggtctagccaagaacatgaggaagcctcacatcttggccatgtccatcccccagaac
tacagctcacagctcacctcctcgcgtaagaaacgggccgtcgctacagacgacacctgc
acagataaaacagagaactgttgcgtgaggaaactctacatcgacttcaggaaagatctg
ggctggaagtggatccaccagccaaaaggttaccatgccaactactgcatgggctcatgc
acctacatctggaatgctgaaaacaaatactctcagatccttgccctgtacaagcaccac
aacccaggagcgtcggcccagccgtgctgtgtaccccaggtcttggaacctctgccaatc
ctctactacgtagggagacaacacaaggtggaacagttgtccaacatgattgtggagagc
tgtaagtgcagctag

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