Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382976
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Entry
139382976 CDS
T10872
Name
(RefSeq) integrator complex subunit 4
KO
K13141
integrator complex subunit 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139382976
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
139382976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS4_8HBD
INTS4_C
HEAT
HEAT_2
VPS15-like_hel
PDS5
Cnd1
SCD
Adaptin_N
Vac14_Fab1_bd
HEAT_EZ
HEAT_GCN1_C
TPR_DNAAF5
NLRC4_HD2
DUF2887
Motif
Other DBs
NCBI-GeneID:
139382976
NCBI-ProteinID:
XP_070983359
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All DBs
Position
24:15112267..15126925
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AA seq
980 aa
AA seq
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MAAHLKKRVYEEFSKVVQLPQEEAPAKKLRLTKPSKSAALHIDLCKASNPTDALQYLLHF
ARSSVEAESVEGVVRILLEHYYKEQDNSVRLKIASLIGLLSKTQNFNPESILDDTLNTFN
TEKSHQVLAQLLDTLLVIGTQLPESLIVRHRLIEVAYKHLSDTYFGVRNKCLQLLGCLGN
VDTPLNKDGQGLVPAVIGGSAPGVSGGVCVRDAQSLISDYFADQDPRVRTAAIKAMLQLH
ERGLKIQQTIYDQACQLLCDDYEQVRSAAVQMVWVLSQLYPESIVPIPSSNEQVRLVDDS
FGKISHMVSDGSWVVRVQAAKTLGNMLQVSPHFLEQTLDKKLMSDLRRKRTAHERAKELY
ASGEFSSGRKWADDAPKEKVDTSAVNLIASGACGAFVHGLEDEMYEVRIAAVDALSALAQ
SSASFAEKCLDFLVDMFNDEIEEVRLQSIHVLRQISTNITLREDQLDTVLAVLEDSSRDI
REALHELLCFTNVSTKECIQLALLELLKNLTKYPTDRNSVWKCLKFLGCRHPTLVLPLVP
ELLSTHPYFHTPEPDMDDPAYIAVLVLVFNAAQSCPTMTALFSDHTFRHYTYLRDSLSHL
VPPLRLPGRTQAPGVSGIEGSGSVESAQLFLQQSLSRISTIHNLQDPGAQDLLNFTIRDL
QRLGELQTELAGAADFSATYLRCQLLLTKALQEKLWTMAVPLCLKHNAMATAAAKQMLEE
TYKLEFLYSGLENRQVATIHHVRLQAKALQLVLTARTRRGVEPLISVCEKFLQEVESFQR
LFVVELPHLQESFVGKLLDLSPKLSACKPGELVKILQTTLRQSGFLNLQLPKQVQRASAT
IIEPTGESDNPLRFTSGLVVALDIDATLEHVQDPHNTVKVQVLYPDGQSHVIQPKPGDFR
SPGPHRHRLITQVYLSHSAWTEACQIEVRLLLAYSSSRLCKAVWSDSSTEGLQPAEGATE
GTIPFGKPVKVFIMPKPARR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacatctcaaaaagcgagtttacgaggaattctccaaagttgttcagcttccc
caagaggaggctccagccaagaagctccgtctgaccaagccaagtaagtctgcagcgctg
catattgacctgtgtaaggcctccaatcccactgatgccctgcagtacctgctgcacttc
gcccgcagctccgtggaggcagagagtgtggaaggggttgtgcgcatactgctggaacat
tactacaaggagcaggataactctgtgcggctgaagattgcctctctgatcggcctgcta
agtaagacccagaacttcaaccctgagagtatcctagatgacactctcaacacattcaac
acagagaagtcccatcaggtcctggctcagctgctggacactctgctggtcatcggcacc
cagctcccagaaagccttattgttagacacagactcatagaggtggcctacaagcacctg
tcagacacatatttcggtgtgaggaataaatgcctacaactcctgggttgcctgggaaac
gtggacacgcccctaaataaagatggacagggattggttccagctgttattgggggcagt
gctccaggggtgtctggtggagtgtgtgtgagagacgcgcagagcctcatcagtgactac
tttgcagaccaggacccaagggtgcgcacggcggccatcaaagccatgctgcaactgcat
gaaaggggactgaagattcaacagaccatttatgatcaggcctgtcagctgctgtgtgat
gactatgagcaggttcgttcggctgccgttcagatggtgtgggtcctgagtcagctctat
ccagagagcattgtgccgattccgtcgtccaatgagcaagtccgtctggtcgacgactcg
tttgggaagatcagtcacatggtttctgatggatcctgggtggtcagggtgcaggctgcc
aaaacactgggtaacatgttgcaggtcagtcctcacttcctagagcagactctggacaag
aagctgatgtcagacctcaggaggaaacgtactgctcatgagcgtgccaaggagctctat
gcgtcaggtgagttctcctcggggaggaaatgggctgatgatgctcccaaggagaaggtg
gacacctcagctgtcaacctgatcgcctcgggggcatgtggagccttcgtacacggactg
gaggacgagatgtacgaggtgcgtattgctgctgtggatgcactctctgctcttgcccaa
tcatctgccagctttgccgagaagtgcctggacttcctggttgatatgtttaatgatgag
attgaggaagtcaggctgcagtccatccacgtcctgagacagatctctactaacatcacc
ctgagagaagaccagctggatactgtactggctgtactagaggattcgtctcgtgacatc
agagaggcgctacatgagttgctgtgtttcaccaatgtgtcgactaaagagtgtatccaa
ctggccctgctggagctgctgaaaaacctcaccaagtaccccaccgaccgcaactctgtc
tggaagtgtctaaagtttctaggttgtcgtcatccaaccctggtgttaccgctggttcca
gagctgctcagtactcacccctacttccacacccctgaaccagacatggacgaccctgcc
tatattgcagtgttggtgctggtgttcaacgcagctcagtcttgtcccaccatgacagct
ctgttctcagaccacacctttagacactacacctacctacgggacagcctctctcaccta
gtacctcctctcaggttaccagggaggacgcaggccccaggtgtgagtggtatagaaggt
tccggcagtgtggagtctgctcaactgttcctccaacagagtctgagcagaattagcact
atacacaacctacaggaccccggggctcaggacctgctcaactttactatcagagaccta
cagagactgggggagctacagacagagctggcaggagctgctgacttctctgccacctac
ctccgctgccaactactgctcaccaaggccttgcaggagaagttgtggactatggccgtc
cccctctgccttaaacacaacgccatggcaactgctgctgccaaacagatgttggaggag
acatataaactggagttcctatatagtggtctggagaacagacaggtggccaccatacac
cacgtcagactacaggctaaggccttacagctagtcctgactgcccgtaccagacgagga
gttgaacctctcatcagtgtctgtgagaagttccttcaggaggtggaatcctttcagagg
ctgtttgtggtggagctgccccacctccaggaaagttttgtggggaagctgttggacttg
agtcccaagctgtcggcctgcaagcctggagaactagtcaagatccttcagaccacattg
agacagagtggcttcttaaaccttcaattacctaaacaggtccagcgtgcgtcggcgacc
atcatcgagccgacaggagagtctgacaacccactgcgtttcacatctggcctggtggtg
gcactagacatcgatgctacgctggagcacgtgcaagacccccacaacactgtcaaagta
caggtgctgtatccagacggccagtctcatgtgattcagcctaaacctggagacttcaga
agtcctggaccacaccgccaccgcctcatcacacaggtctacttgtctcactccgcatgg
actgaggcgtgtcagatcgaggtgaggctgctgctggcctacagctcatctcgtctctgt
aaggcggtgtggagcgacagcagcactgaaggcctccagccagcagagggtgccactgag
ggaaccattcccttcggcaaacctgtcaaagtcttcatcatgcctaaacctgcccgccgc
tga
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