Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383375
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Entry
139383375 CDS
T10872
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139383375
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139383375
NCBI-ProteinID:
XP_070983997
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Position
25:complement(35817875..35862630)
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AA seq
1798 aa
AA seq
DB search
MKKSRGHKSDHGKGGGGDEAAILETEDLDFTGGMGGGVGLDPDTISLASVTAVTTNVSNK
RSKPDIKMEPSAGRPVDYQVSVTIVEARQLVGLNMDPVVCVEIGDDKKYTQMKESTNCPY
YNEYFVFDFHVPSDVMFDKILKLSVIHSKNLLRSGTLVGSFKLDIGTVYSQPEHQFFHKW
ALLSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKATETDEDDIEGNLLLPEGVPAERQW
ARYYVKIYRAEGLPKMNTSIMANVKKAFIGENKDLVDPYVQILFAGQRGKTSIQKSSYEP
IWNEQIVFTEMFPPLCKRMKVQIRDSDKVNDVALGTHFIDLRKIANDGDKGFLPTLGPAW
VNMYGSTRSYTIMDEHQDLNEGLGEGVSFRARLLVSLCVEILDTSSPEVMSSTEVKVEGV
PKISESATGKVEEFFLFGAFLEATMIDRKIGDKPICFEVTIGNYGSEIDGVTKVKSSSGK
KSGGDGDEEETELIHGSSDEEEGDDDNDLVSVSTTPPMKPVITDRNYFHLPYFERKPCIY
IKSWWQDQRRRLYNANLIDNIADKLEEGLNDVQEVIKTEKAYPERRLRGVLEDLSNGCSQ
FLTLANKDQNQTGRTKLDKERLKSCMRELENLGQQAKTIRTQVKKNTVRDKIKLVQNFLH
KLRFLADEPQHSIPDIYIWMMSNNKRIAYARVPSKDILYSGVDEETGKDCGKVKTIFLKL
PGKKGFGAAGWTVQAKTEIYLWLGLNRQRKDFLSGLPNGFEENKMLKGPGSQSAPPISLT
YMMKQIFQLRVHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLMVF
DNVELFGEVGELRDDPPIIVIEIYDQDTVGKAEFMGRTFAKPITKMADEHYGPPRFPPQL
EYYQIYRGNCAAGEMLAAFELLQIGPHGKADLPPIDGPTDMDRGPILPVPLGIRPVLSKY
RIEVLFWGLRDLKRVNLAAVDRPRVDIECAGKGVQSSLIQNYKKNPNFGTLVKMFEVDLP
ENELLHPPLNIRVVDCRAFGRYTLVGNHAVTTLRKFIYRAADKEANNWNTQEEIIVNYEP
EPSIKKMETMVKLDSGSDAVVKIEEDDKGGKKKKRKKGGDEVEEEEFDESMLDWWSKYFA
SIETLMEILKAQEAAMADAEEKEDQDISAEGGEIKPDDSPVKGKKGKGKDKRRPGDMPEK
KKHKLNELQVYPKELEKEFDNFEDWLHTFNLFRGKAGDDDDQNMADEDRIIGKFKGSLCM
YKVPVSDEMQREMGFDSNMGMFQNIPTNDPINVVVRVYIIRATDLHPADINGKADPYIAI
KLGKSDIKDKENYLSKQLNPIFGKSFDIEATFPMDSTLTVSVYDWDLVGTDDLIGETKLD
LENRYYSKHRAICGLPSKYAVHGYNVWRDPLKPTQILAKLCKEGKLDGPHYGPGGRVKVA
NRIFMGPTEIEDENGLKKQTDEHLALTALKHWEDIPRVGCKLIPEHVETRPLLNPDKPGI
EQGRIEMWVDMFPKDMPAPGPAIDIAPRKPKKFELRVIIWNTDEVILEDDDIFTGEKSSD
IFVRGWLKGQQEDKQDTDVHYHSLTGEGLFNWRFIYPFDYLQAEEKIVISKKESMFAWDE
TEYKIPARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSINMVLNEQDIPMVS
IFKQRRIKGWWPFLARDENDEFELTGKVEAELQLMTAEEAEKNPVGEGRNEPEPLEKPNR
PDTAFLWFLMPFKAIKNLICNQYFWLTVKLVVALLLVLILGLFIYSMPGYMVKKLMGA
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcacgtggccataagtcagaccacgggaaaggaggagggggcgatgaggct
gccatcttggagacagaggatctggacttcacgggagggatgggagggggagtgggtctt
gaccctgacaccatctccctggcctcagtcacagccgtcaccactaacgtctccaacaag
agatcaaaaccagacattaagatggaacctagtgccgggagaccagtggattaccaagtt
agtgttaccatcgtagaggccagacagctagtagggctgaacatggacccagtggtctgt
gtggagatcggagacgataagaagtacactcagatgaaggagtcgacaaactgcccatat
tacaatgagtattttgtctttgacttccacgtcccatcggatgttatgtttgacaagatc
ctgaagctttcggtcatccactccaagaacctgctgcgtagtggcaccctggttggctcc
ttcaaactggacataggcaccgtctactcacagccagaacaccagtttttccacaaatgg
gcccttctctctgaccctgatgacatcactgccgggtgcaaaggttacattaaatgtgac
atcgccgttgtggggaaaggagacaacatcaagactccccacaaggccacagaaaccgat
gaagatgacatagaaggtaacctgctgttacctgagggggttcccgcggagcgccagtgg
gctcgctactatgtgaagatctacagagccgagggccttcccaagatgaacaccagcatc
atggctaatgtcaagaaggcttttataggggagaacaaggaccttgtggacccttatgta
caaatactgttcgctggccagagggggaagacatctatccagaagagcagctacgagccc
atctggaacgagcagatcgtcttcactgagatgtttccaccgctctgcaaacgcatgaag
gtccagatccgagactcggacaaagtgaacgacgtggctctcggaacacacttcattgac
ctgagaaagatcgccaatgatggagacaaaggcttccttcccaccctgggtccggcctgg
gtaaacatgtatggctccacccgtagctacaccatcatggacgagcaccaggacctgaac
gagggtctgggggagggggtgtccttcagggcccgtctgctggtcagcctgtgtgtggag
atcctggacacctcctctccagaggttatgagctccacagaggtcaaggtggagggggtg
cccaaaatctcagagagcgccacagggaaagtggaggagttcttcctcttcggggcgttc
ctggaggccaccatgattgacaggaagatcggggacaaaccaatctgcttcgaggttacg
ataggtaactatgggagtgagattgatggtgtgaccaaagtcaagtcgagtagcgggaag
aagagtgggggagacggagatgaagaggagacagagctgatccatggatctagtgatgaa
gaggagggagatgatgacaatgacctggtctcagtgtccaccaccccgccgatgaaacca
gtcatcaccgacagaaactatttccacctgccttactttgagaggaagccgtgtatttat
atcaagagctggtggcaggaccagagaagaagactgtacaatgccaaccttatagacaac
attgccgataaactggaggagggtctgaacgatgttcaggaggtcattaagacagagaag
gcatatcctgaacgcagactgagaggggtcttggaggatctcagcaatggatgcagtcaa
tttctgactctggctaacaaggaccaaaaccagactgggaggaccaagctggacaaagag
agactcaagtcctgcatgagggaactggagaacttaggtcagcaggctaagaccatcagg
acacaggtgaagaagaacacagtgagggataagatcaagctggtgcagaactttctccac
aagctcaggttcctagctgatgagccgcagcacagcatccctgacatctacatctggatg
atgagtaataacaagcgaatcgcctacgcccgtgtcccctccaaagacatcctgtactcc
ggggtggacgaggagactgggaaggactgtggcaaagtcaaaaccatcttccttaagctg
cctggtaagaagggctttggggcagctggctggacagtgcaggctaagacagagatctac
ctgtggctgggtctgaaccgtcagaggaaagacttcctgtctggtctgcccaatggcttc
gaggagaacaagatgctgaaaggacctggctcgcagtctgctcctcccatcagcctcaca
tacatgatgaagcagatctttcagctgagggtccatatgtaccaggctcgcagcctgttt
gcggcagacagcagcggcctctctgaccccttcgccagggtcttcttctccacacacagc
caggtcacagaggtgttgaatgagacactgtgtcccacctgggaccagctgatggtgttt
gacaacgtagaactgttcggagaggttggcgaactcagggacgaccctcctataatcgtc
atagaaatctatgaccaggacacggtgggaaaagcagagttcatgggcaggacttttgcc
aagcccataaccaagatggctgacgaacactacggacctccacgtttccctccccaacta
gagtactaccagatctatagggggaactgcgccgctggagaaatgctggcggccttcgaa
ctgctgcagattggtccgcatggtaaagctgacctgccgcccatcgacggtcccacagac
atggaccgtggtcccatcctacctgtccctctgggcatcagaccagtcctcagcaagtac
aggatcgaggtgctgttctgggggctcagggacctgaagagggtcaacctagctgcggtg
gacaggcctcgtgtggacatagaatgtgccggtaaaggggtccagtcttccctgatccag
aactacaagaaaaatcctaacttcggcaccctggttaagatgtttgaggtggatctgcct
gagaatgagctgctccaccctcccctgaacatcagagtggtggactgcagagcgttcggt
cgctacaccttagtggggaaccatgctgtcaccacactacgcaagttcatctaccgggca
gcagacaaggaagccaacaactggaacactcaagaggagatcattgtcaactacgagcca
gaaccctccatcaagaagatggagaccatggttaagctggactctgggtctgatgcagtg
gttaaaattgaggaggatgataagggagggaagaagaagaagagaaagaagggaggagac
gaggtggaggaggaagagtttgatgagagcatgttggattggtggtcaaagtacttcgcc
tcgatcgaaactctgatggagattctcaaggctcaggaggcagctatggcagatgctgag
gagaaagaggaccaagatatttctgctgagggtggagagatcaaacctgatgactctcct
gtcaaaggaaagaaaggaaaaggaaaggacaagaggaggcctggagacatgccagagaag
aagaagcacaaactcaatgagctgcaggtgtaccccaaggagttggagaaggagtttgat
aactttgaagactggcttcacaccttcaacctgttcagagggaaggccggagacgacgac
gaccagaacatggcggatgaggacaggattattggcaaattcaaaggttctctgtgcatg
tacaaagtgccagtgtcagatgagatgcagagggagatgggcttcgactccaacatgggc
atgttccagaacattccaaccaacgacccaatcaacgttgtagtccgggtctatatcatc
agagcaacggatctgcatccagcggatatcaatggaaaagctgatccgtacatcgctatc
aaactaggaaagtcagacatcaaagacaaagagaactacctctccaagcaactcaacccc
atctttggcaaatcttttgacatcgaagccacatttcccatggactctacactaacagta
tccgtctatgactgggacttagtgggcactgacgacctgattggggagactaaactggat
ctggagaaccgttactacagcaagcacagagccatatgtggcctcccatccaaatatgcc
gtccatggctacaatgtgtggcgggaccccctgaagccaacccagatcctggccaagctg
tgtaaagagggcaagctggacgggccccactatggccctggaggacgggtcaaggtggcc
aacaggatcttcatgggcccaaccgagatcgaagatgaaaatggtctgaagaagcagaca
gatgagcacctggccctgacggcgctgaagcactgggaggatatccctcgggtgggctgt
aaactcatcccagaacatgtggagaccaggccactcctcaaccctgataagcctggcatc
gaacaggggaggattgagatgtgggtggacatgttccccaaggatatgcctgcacctgga
ccggccattgatatcgcacccagaaaaccaaagaagtttgaactgagggtgatcatctgg
aacacagacgaggtcattctagaggatgatgacatcttcactggagagaagtccagtgat
atcttcgtgcggggctggctgaaaggtcagcaggaggacaagcaggacacagacgtccac
taccactccctgacaggggagggtctcttcaactggcgcttcatctacccctttgactac
ttacaggccgaggagaagatcgtcatctctaagaaggagtccatgttcgcctgggacgag
actgagtataagatccctgctcgtctcaacctacaagtctgggatgctgatcacttctct
gcagatgacttcttaggcgccattgagctggatctgaaccgtttccctcgtggagcgaag
acagccaagcagtgctccatcaacatggtgctgaacgaacaggatattcccatggtgtcc
atcttcaaacagaggaggatcaagggctggtggcccttcctggccagagacgagaatgac
gagtttgaactcactgggaaagtggaagcagagctgcagctgatgactgcagaggaggct
gagaagaacccagtaggtgaaggacgcaatgaacctgaacccctggagaaacccaaccgt
ccagacacagccttcctgtggttccttatgcctttcaaggccatcaaaaacctcatctgc
aaccagtacttctggctcacggtcaagttagttgtagccctgctgctggtgctcatcctg
ggcctcttcatatacagcatgcctggatacatggtcaagaagctaatgggggcttga
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integrated database retrieval system
