Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383749
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Entry
139383749 CDS
T10872
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139383749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139383749
03036 Chromosome and associated proteins [BR:
ocla03036
]
139383749
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139383749
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
139383749
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
139383749
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
139383749
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
139383749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
139383749
NCBI-ProteinID:
XP_070984410
LinkDB
All DBs
Position
25:complement(2311320..2518802)
Genome browser
AA seq
386 aa
AA seq
DB search
MNSMSPEVALNRISPELRPLLCSVVRNGRVGLDSTNCLRVTDLKTGCTSLTPGPCCDRFK
LHIPYAGETLKWDIIFNARDPELPPDFIFGEDAEFLPEPSELPHLVQWDAGDPECLLQLV
KELIQQYHQYQCQRLRESSRLLFEYDSLLEDPNYSRSMEIYAGHKNSWTGEFSARFLLKL
PVDFSNIPVYLLKDTTLDPGEDVALLSVSFEDAEATQVFPKLYLSPSIEHALGGSSALHI
PAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGMGVVEYDAEGFTKL
TLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSVYHFTNSGQLYSQVQKSYPYSPRWDGNE
MAKRAKAYFKSFIPQFQEGAFATGKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatgtcccctgaggttgcactgaaccgcatctctcctgagctgcgccccttg
ttgtgcagtgtggtgcggaatggtcgagtgggccttgactccaccaactgcctgcgtgtc
acagacctcaagactggatgcacgtctctgactccagggccctgttgtgatcgattcaaa
ctgcacatcccctacgctggagaaaccttgaaatgggatatcatcttcaacgcacgggat
ccagaactacctccagatttcatatttggagaggatgcagaattcctgccagaaccctcc
gaactcccacacctggtccagtgggatgcgggggacccggagtgcctgcttcagctggtg
aaggagcttatccagcagtaccaccagtatcagtgccagcgtctgcgcgagagctcccgg
ctgctcttcgagtacgacagcctgctcgaggaccccaactatagccgcagcatggagatc
tacgccgggcacaagaacagctggacgggggagttctccgctcgcttcctgctcaagctc
cctgtggactttagcaacatccccgtctatctcctcaaggacacaacgttggaccctggg
gaagacgtggctcttctctcagtcagctttgaagacgcagaggccacccaagtgttccct
aaactctacctgtcccccagcattgaacacgcacttggaggctcctctgcactacacatc
ccagctttccctagtggaggctgcctcattgactatgtacctcaagtgtgccagctcctc
accaacaaggtgcagtatgtcattcaaggctaccacaagaggagagagtacattgctgcc
tttctcagtcactttggaatgggggtggtggagtacgatgcagagggattcaccaagctc
actcttctcctcatgtggaaagacttctgtttccttgtccatgtggacctccctctgtac
ttcccgcgggaccagcccactctgactttccagtctgtgtaccacttcaccaacagtggg
cagctgtactcgcaggtgcagaagtcctacccttacagcccccgctgggacggcaacgag
atggccaagcgagccaaagcatacttcaagagcttcatccctcagtttcaggaaggggcc
tttgccactgggaaactctag
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