Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384191
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Entry
139384191 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 56-like
KO
K25425
leucine-rich repeat-containing protein 56
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139384191
04812 Cytoskeleton proteins [BR:
ocla04812
]
139384191
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Dynein assembly factors
139384191
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
139384191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
HTH_SB
LRR_9
LRR_8
LRR_14
Tnp_IS30_N
LRR_NXF2
LRR_NXF1-5
HTH_38
Motif
Other DBs
NCBI-GeneID:
139384191
NCBI-ProteinID:
XP_070985349
LinkDB
All DBs
Position
1:35204933..35225867
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AA seq
364 aa
AA seq
DB search
MAKTRDLCKDIRDTIVDLHKAGMGFRTIGRQLGAYLPKLVQLKINNSMITSVGDLGTTLS
HLQVLWISHCSLADLDGVPSSSLKELYVAYNRVSDMSQLSMLENLQLLDLEGNDVNDLVQ
VQYLGRRSQLCTLTLEGNPVCMHPHPNATQFEEEKGYCYRLAVRELVPQLHYLDYMCAEE
KAGPGCTNSMGEDWALLRESIKDGSCVAMAQEERAASVSAYSRPSSGQRLANSLFSSHPS
SRPVSARPLSAVDSRPLSRSXPLSGAGSRAFSPSGSRSGSADAGPASVDPDASVLTHGAG
KILFCGNPVQALRARRQKMRTVSTPSTPPLHVLEHTYDLSEQDGHQRSDVFSELRAWREQ
HNMY
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaccagagatttgtgtaaggacatcagggatacaattgtagacctacacaag
gctgggatgggcttcaggacaataggcaggcagcttggtgcctacttgcccaagctggtg
cagctgaaaattaacaacagtatgataacgtcagtaggggacctgggaaccacgctgtct
caccttcaggtgctgtggatatctcactgcagcctggcagacctggatggtgtcccctcc
tcctctctcaaggagctgtatgtggcctacaacagagtgtcggacatgagtcagttgagc
atgctggagaatctacagctgttggacctggaagggaatgatgtgaatgacctggtgcag
gtgcagtacctgggccggcgctcccaactctgcacgctcaccctagagggaaaccctgtc
tgtatgcacccccaccctaatgccacacagttcgaggaggaaaagggttactgctaccgg
ttggcggtaagggagctggtcccacagctgcattacctagactacatgtgtgcagaggag
aaggcagggcctggctgcaccaactccatgggggaagactgggccctgctcagagagtcc
atcaaagacggcagctgcgtagcgatggcacaggaggagagagcagccagtgtgagtgcc
tactccagacccagctctggccagcgcctagctaacagcctcttcagttcccatccctcc
agtcgaccggtcagtgccaggcccctctcagcagttgactccagacccctttctaggtcg
tgacccttatcaggggctggatccagagccttctctccttccgggtccagatccggttct
gctgatgcaggtccagcctctgtggacccagacgctagcgttctgacgcacggtgcaggg
aagatcttgttctgtgggaaccctgtccaggccctcagagccaggcgacagaagatgagg
actgtgtccactccaagcaccccacccctccatgttttggagcacacatatgacctttcg
gagcaggacggacaccagcgcagcgacgtgttctctgagctcagggcctggagggaacag
cataacatgtactga
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