Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384892
Help
Entry
139384892 CDS
T10872
Name
(RefSeq) neurotrophic factor BDNF precursor form
KO
K04355
brain-derived neurotrophic factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139384892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139384892
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139384892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
139384892
NCBI-ProteinID:
XP_070985893
LinkDB
All DBs
Position
26:23116782..23132044
Genome browser
AA seq
269 aa
AA seq
DB search
MTILFLTMVISYFSCMRAAPMRDAPGMRGHRTEGYLGAAVTAGRGHGTPQSGGGPGQHGG
LPSLTDTFEQVIEELLEVDGEAAQLGRGADKGQGGGGPSSVVTTETKDVDLYASRVMISN
QVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTAVDKKTAID
MSGQTVTVLEKVPVPNGQLKQYFYETKCNPMGYTKEGCRGIDKRHYNSQCRTTQSYVRAL
TMDSKKKIGWRFIRIDTSCVCTLTIKRGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctgttccttactatggttatttcatacttcagttgcatgagagctgctccc
atgagagacgccccgggtatgcggggccaccgaacggaaggctacttgggtgctgcagtg
acagccggccggggccacgggactccacagagcggcggtgggccgggccagcatggggga
ctgccctcgctcacagacacgtttgagcaggtgattgaggagctcttggaggtggatgga
gaagcagctcagctggggcgtggggctgacaagggccagggaggagggggtccttcctct
gtggtcaccacggagaccaaggatgtcgacctgtatgcatcgcgggtgatgatcagcaac
caagtgcctttagagccaccgctgctttttctcctggaggaatacaaaaactacctggac
gccgctaacatgtccatgagggtacggcggcattctgacccgtcgcggcgtggcgagctg
agtgtgtgtgatagtattagccagtgggtgacagctgtggacaaaaagacagcaatagac
atgtctgggcagaccgttaccgtcctggaaaaagtccctgtccccaatggccaactgaag
caatacttttatgagaccaaatgtaaccctatggggtacacaaaggagggctgccgtgga
atagacaagaggcattataactcccaatgcaggacaacccagtcctacgtgcgagcgctc
accatggatagcaaaaagaagattggctggcggtttataaggatagacacatcatgtgta
tgcacattgaccattaaaagaggaagatag
DBGET
integrated database retrieval system
