Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386497
Help
Entry
139386497 CDS
T10872
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139386497
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
139386497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
SR-25
Motif
Other DBs
NCBI-GeneID:
139386497
NCBI-ProteinID:
XP_070988168
LinkDB
All DBs
Position
28:complement(36094001..36137802)
Genome browser
AA seq
652 aa
AA seq
DB search
MATVGTDKELSDLLDFSAMFAPPVLNGKNRPTTLASSQFGGTGMDDRSGSTPWASGEQNS
PSFNQGRGYGEGTHYNEHECLASTPMFGSGIVGKAERGPYSSFGAQPGFMPSEMPMPSPD
ALSPSGLKSGSQFYPSQFNPRRRSTQESMDGQPKKIRKVPPGLPSSVYASASGEDYNRDV
AGYPASKPGNVGYPGSFYMQEGLHPSPDPWSSAGPMGQPGYSAVLGNSPHLGQPAPFTAI
NPQDRLKRQPLPLSPQNYPLHGSEVNGSFHPGSAGYGVPNHTPPINGTDGIMANRGTAPP
SSGDEIGKALASIYPSDHNSNTFPSSPSTPVGSPQAIAGSASQWSRGSGQATPSPNFEGG
LQALQNKMEDRLEEAIHVLQRHAGGQGGPGGLTDMHSLLSAGIGGLAQAFNNAGLGLANR
LPNLMANHHEDSAGPPSSGPGLHVHHGPPSAQPGSQPEGFTSLSRSTHSSSGADIKREDK
EDDENSSVADKSEDEKKDSKARTRTRETFSFQTFSSSLSDTGADSSCSVASPSDDNLTAE
EKEKRERERRSANNVRERVRVRDINEAFRELGRMVQVHLRGDKAQTKLIILQQASQVIMG
LEKQVRERNLNPKAACLKRREEEKVSGVDPQMQMGGGHPGLGGDGHNSVNHM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtggggacagacaaggagctcagcgacctgctggatttcagcgcgatgttt
gcacctccggtgttgaatgggaagaacaggcccaccactctagccagcagccagttcgga
ggcactggtatggatgatcgaagcggttctaccccctgggcatctggagaacagaacagc
ccttccttcaaccagggacggggttatggtgaaggaactcattacaatgagcacgaatgc
ctggcttccacccctatgttcggctcaggaattgtgggcaaagctgagcgaggaccttac
tcttcttttggagcacagccgggctttatgcccagtgagatgcccatgcccagtcctgat
gccctgtccccctcgggtctgaagtcaggctcccagttctacccctcccagttcaatcct
cgcaggagatccacccaggagagcatggatggccagccaaaaaagatcaggaaagttccc
cctggcctgccctcttcagtttatgcgtcggcctccggagaggactataaccgagacgtt
gcggggtatcctgcctccaagcctgggaacgtgggctaccccggctccttctatatgcaa
gaaggtctgcacccctcccctgacccgtggagttctgccgggccgatggggcagccgggc
tactctgctgtgctgggtaactcccctcacctgggccagcccgcccccttcacggccatc
aacccgcaggacagactgaagcgccagccgttgccactttcgccccagaactaccccctg
cacggcagcgaggtgaacgggagctttcaccctgggtccgctggctacggagtccccaac
cacacaccccccatcaatggaacagacggcatcatggccaaccggggaacagctccacct
agctcaggagatgagatcggcaaagccctggcatcaatttatccttcggaccacaacagc
aacaccttcccttcatctccatctactccagtgggctctccccaggccatagcaggttct
gcctctcagtggtcccggggctcgggacaggccacaccctctccaaactttgagggagga
ctgcaggctctgcaaaacaaaatggaggaccgtctggaggaggcaatacacgttctgcag
cgccacgccgggggacaggggggcccaggggggctgactgacatgcacagcctcctcagc
gctgggataggaggtcttgcccaggccttcaacaacgctggcctgggactggccaacaga
ctgcccaaccttatggccaaccaccatgaggactctgctggtccgccctctagtggtcct
ggtctgcatgttcaccatggccctccctcagcccagcctggcagccagcctgagggcttc
accagcctctctcgctccacacactcgtccagtggcgctgacatcaaaagggaggacaag
gaggatgacgagaactcctccgtggctgacaagtcagaggacgagaagaaagactcgaag
gctcgcacccgaacaagagagacgttctccttccagaccttctcttcctccctatcagac
acgggagcagacagcagctgcagcgtggcctcgcccagcgacgacaacctgacggcagag
gagaaggagaagcgggagcgggagcgccgctcggccaacaacgtccgggagagggtgcgc
gtgcgcgacattaacgaggcgttcagggagctgggccggatggtgcaggtgcacctgcgc
ggcgacaaggcccagaccaaactcatcatcctgcagcaggcctcgcaggtcattatgggc
ctggagaagcaggtccgagagcgtaacctgaaccccaaggcagcgtgtctgaagcggagg
gaggaagagaaggtttcgggggtggacccccagatgcagatgggaggggggcaccccggg
ttaggtggcgatggacacaactctgtgaaccatatgtaa
DBGET
integrated database retrieval system
