Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386570
Help
Entry
139386570 CDS
T10872
Name
(RefSeq) NT-3 growth factor receptor-like
KO
K05101
neurotrophic tyrosine kinase, receptor type 3 [EC:
2.7.10.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139386570
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139386570
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
139386570
Protein kinases [BR:
ocla01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
139386570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRRCT_2
I-set
Ig_3
ig
LRR_8
Ig_2
LRR_5
LRRNT
Haspin_kinase
C2-set_3
TrkA_TMD
LRR_4
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
139386570
NCBI-ProteinID:
XP_070988366
LinkDB
All DBs
Position
1:complement(22213933..22501551)
Genome browser
AA seq
816 aa
AA seq
DB search
MDSFFIPPRICWWRVLFLLTIFQDYLSNMLDCPPTCSCSPTEIYCNKSDNGKFFPLLALQ
DTGNNGNNSIEDVFKNITSIHIENWTGLQTLKDVDMELYTGLQRLTIMNGNLRGIQARAF
SQNPHLRYINLSKNPLTTLSWQLFQNLQLFELRLEEVVFECGCDIRWIQLWQQRGEAGLN
TQQLFCNNGASKIPLQAMNISLCDLPDISVTHFNLTVVEGDRVTITCNGSGSPLPEVDWT
VIDLHSINTHQSTVYWPNVHSINLTLFNVSRDDNFYMLTCIAENKVGMANTSIQLTVHFP
PTILKLDEPERRHETCIEFTVRGNPLPTLRWFHRDNEISPSDYIRTEMDTYQDYLEGCLN
FKDPTHHNNGNYTLEASNFLGVTTKTVYGHFLNAPFPDDYGDYGTPTPTITVTHRPEEDT
FGVSIAVGLAGFACVLLVVLFVLINKYGRRSKFGMKGPVAVISGEEDSASPLHHVNHGII
TPCTLDAGPDAVVIGMTRIPVIENPQYFRHGHNCNKPATYVQHIKRRDIILKRELGEGAF
GKVFLAECYNLSPTKDKMLVAVKTLKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCVD
GDPLIMVFEYMKHGDLNKFLRAHGPDALILVDGQSLQTNGELGLSQMLHIATQIAAGMMY
LASQHFVHRDLATRNCLVGNGLLVKIGDFGMSRDIYSTDYYRVGGHTMLPIRWMPPESIM
YRKFTTESDVWSFGVILWEIFTYGKQPWFQLANNEVIECITQGRVLERPRACPKEVYDIM
LGCWQREPQQRLNIKDIQKILYALGKATPVYLDILG
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggattcattttttattccaccacgaatttgctggtggagggtattgtttcttttgacc
atctttcaggactacttgagcaatatgctggactgcccgccaacctgcagctgttctcca
actgagatctattgcaataagtctgacaatgggaaattctttcccctgcttgcactgcaa
gatactgggaacaatggaaataacagtatcgaagatgtgttcaagaacatcacctcaata
cacattgagaactggactggcctgcagacgctgaaagatgtggacatggagctgtacact
ggacttcagagactaacaatcatgaacggcaacctgcgaggtatccaggccagagccttc
tcccagaacccccacctgcgctacataaacttatcgaagaaccctctgaccacattatca
tggcaactcttccagaatctgcaactcttcgagctgaggctggaagaagtggtgtttgag
tgtggctgtgatatccgctggatccagctgtggcagcagcgaggggaggctggcctgaac
acccagcaactcttctgcaacaacggagcctccaagatccctctgcaggctatgaatatc
tcactctgtgacctgccggacatcagtgtgacgcactttaacctcacggttgttgagggg
gacagagtcaccatcacctgtaatggatctggatcccccctacctgaggtggactggacc
gtcattgacctccactccatcaacactcaccagtccactgtgtactggcccaatgtccac
tccatcaatctgaccctgttcaacgtgagtcgcgatgacaacttctacatgctgacctgt
atagcagagaacaaagtggggatggccaacacctcaattcagctcactgtccatttcccc
cccaccatcctgaagctggatgagcccgagcgtcgccatgaaacctgcatagagttcacg
gtgcgtggcaaccccctgcccaccctgcgctggttccaccgggacaacgagatctccccc
agtgactacatccgcactgagatggatacctaccaggactacctagagggatgcctcaac
ttcaaggaccccacgcaccacaacaatggcaactacactctggaggctagcaacttccta
ggagtcaccaccaagacagtgtatggacacttcctcaacgccccgtttccagacgattat
ggtgattatgggactcctacgccaaccatcacagtaacacacaggcctgaggaggacaca
ttcggggtgtctattgctgtcggcctggctggatttgcctgtgtccttcttgttgtcctg
tttgttctcatcaacaaatatggacggcggtcaaagtttggaatgaaaggaccagttgca
gtgatcagtggtgaggaagactcggctagccctcttcaccatgtcaaccatggcatcatc
accccctgtacccttgacgctgggccagatgctgtggtcatcgggatgacccgtatccct
gtcattgagaacccgcaatacttcagacacggacacaactgtaataagcctgctacctac
gtgcaacacataaagcgtcgggacatcattctgaagcgggagctgggagagggggccttt
gggaaggtgttcctggcagagtgctataacctcagccctaccaaggacaagatgcttgtg
gctgtcaagacgctgaaggaccccacccttgcagcgagaaaagatttccagagggaggcg
gaactattgaccaacctgcagcacgagcacattgtcaagttctacggtgtgtgtgtggat
ggagaccccctcataatggtctttgagtacatgaagcacggagacctcaataagttcctc
agagctcatgggcctgatgcgttgatcctggttgacggacagtcgctgcagaccaatggg
gagctgggcttgtctcagatgctgcacattgccactcagattgccgcagggatgatgtac
ctggcctcccagcactttgtgcaccgtgacttagccactcggaactgcctggtgggcaac
ggcctgctggttaagattggtgactttggaatgtccagggacatctacagcacggattac
taccgggtgggaggccacaccatgctgcccatccgctggatgccccctgagagcataatg
tataggaagttcaccacagagagcgacgtgtggagcttcggtgtcatcctctgggagatc
ttcacctacgggaagcagccatggtttcaactggccaacaacgaggtcatcgagtgtatt
acgcaaggacgggttctggagaggccacgagcttgtcccaaggaggtgtatgacatcatg
ttgggttgctggcagagggagccccagcagaggctgaacatcaaggacatccagaaaatc
ctttatgccttgggaaaagccacacctgtctacctggacatcctgggctag
DBGET
integrated database retrieval system
