Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387011
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Entry
139387011 CDS
T10872
Name
(RefSeq) C-X-C chemokine receptor type 4-like
KO
K04189
C-X-C chemokine receptor type 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
ocla03260
Virion - Human immunodeficiency virus
ocla04020
Calcium signaling pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04144
Endocytosis
ocla04672
Intestinal immune network for IgA production
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139387011
03260 Virion - Human immunodeficiency virus
139387011
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139387011
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139387011
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139387011
09142 Cell motility
04810 Regulation of actin cytoskeleton
139387011
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
139387011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139387011
04050 Cytokine receptors [BR:
ocla04050
]
139387011
04090 CD molecules [BR:
ocla04090
]
139387011
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Chemokine
CXC Chemokine
139387011
Cytokine receptors [BR:
ocla04050
]
Chemokine receptors
CXC Chemokine
139387011
CD molecules [BR:
ocla04090
]
Proteins
139387011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
139387011
NCBI-ProteinID:
XP_070989061
LinkDB
All DBs
Position
28:complement(33399095..33400684)
Genome browser
AA seq
373 aa
AA seq
DB search
MSYYEHFVISESDNDYNDTSSGFGSGLGDFGTGFEEPCDRELLSPSVQRIFLPVVYGFIF
TLGITGNGLVVFVLGCQRKARLSLTDRYRLHLSAADLLFVLALPFWAVDAALGDWRVGAV
MCVGVHVIYTVNLYGSVLILAFISLDRYLAVVKATVTSTTHTRQLLAHRLVYAGAWLPAG
LLAIPDMVFARTQEAGEGEMVCTRLYPPENAPLWVSLFHLQTVLVGLVVPGLVLLVCYCV
IVSRLTRGPLGGQRQKRRAVRTTVALVLCFFLCWLPYCIGIAVDALLRLELIPRGCTLES
GLGVWLAVSEPMAYAHCCLNPLLYAFLGVGFKSSARRALTLTRTSSLKIVPRRRTGAMTS
TTTESESSSLHSS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcctattatgagcactttgtgatatcagaatcggataatgactacaatgacacaagt
tccggttttggttctggcttgggggatttcggcactggatttgaggagccgtgtgaccgt
gagctgctgagcccaagtgtgcagcgtatcttcctcccggtggtgtacggcttcatcttc
accctggggatcactgggaacggcctggtggtgttcgtactgggctgccagcggaaggcc
cgtctaagcctaacggaccgctaccggctgcacctctccgctgctgacctgctcttcgtt
ctggcactgcccttctgggctgtagatgctgcgctcggggactggcgcgtcggagcggtc
atgtgtgtgggcgtgcacgtcatctacacagtgaacctatatggcagtgtgctgatccta
gccttcatcagtctggaccgctaccttgcagtggtcaaagccacggtaaccagcaccaca
cacacccggcagctgctggcacacaggctggtgtacgctggcgcctggctgcctgctggt
ctcctggccatccctgatatggtgttcgctcggacccaggaggcaggggagggggagatg
gtgtgcacgaggctctacccgccggagaacgccccactgtgggtgtccctgttccacctg
cagactgtgctggtggggctggtggtgccgggcctggtgctgctggtgtgttactgcgtg
attgtgtccaggctgacccgggggccgttggggggccagagacagaagaggagggcggtg
cggaccactgtagctctggttctctgtttcttcctctgctggctgccgtactgcattggc
atcgccgtggatgctctcctccgcttggagctgatccctcgaggctgtacgctggagtca
ggcctgggggtgtggttagcggtgtctgaaccaatggcgtacgctcactgctgcttgaat
ccgctgctctatgcgttccttggagtggggttcaagagttctgctcgccgcgccctcaca
cttacacgcacctccagcctgaagattgtcccacgtagacgaacaggcgccatgacgtcc
acaacgacagagtcagagtcatctagtctgcactccagttaa
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