Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387089
Help
Entry
139387089 CDS
T10872
Name
(RefSeq) desmoplakin-A-like isoform X1
KO
K10381
desmoplakin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
139387089
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139387089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139387089
NCBI-ProteinID:
XP_070989185
LinkDB
All DBs
Position
28:26813927..26840125
Genome browser
AA seq
2601 aa
AA seq
DB search
MTMSSETIDQLNECAIELQQMRQPNDIIIRSVQQLQSMQSGIISSISGTTQRQNRGSIGW
EERGRSYADAMSWIGQQKRLIETSPWGDDAATIEQQILSQNKLHSSIQRSHEVDHARDEL
AQKDDKGGLHSLQQEWDSLQKMSFARTGQLRELQNIIEEISRAIMWVNEREEEELVFNWG
DKNIDVYIPKKQESYSKLMSALEEKEKELNKLKQKVDGLLKNNHPASDKIEAYMDTLQTQ
WSWLLQITKCIHVHLKENAAYSQFFKEANETYSKLQKDHEIIRKKFTCDKGTPLENLTEL
LKNLEREKERVMENKRQVKHLVNKSKSIVRLRPRNPEEKSSTAVIVQALCDFKQDQKGIL
KGDEGILKDNSQRSKWHVTGPGGLDMLIPSVCLLIPPPNPLSIGLANKNEQYYEAIMGIW
NQLYINIKSLISWQYCVKDINHINSLTLTMLSQMRPEEYRNIIKSLETHYQEFLRNSHGS
EMFGEDEKKKMEGQYSGAQSHYDTLVIGLPTYNQSNVVVVQPEPSIKANTTKITNTSLKE
TSISTQGSNMSLTLLSDLQALRCRLELAESGLSHHLHVSLGENSVQECSQHLLKLEGIHN
DLDGVRDEYLRLRERVVKQLEGTAADSEQAKFLRKELDLLNQKLGDLQGLSSAYLQRLSY
LQNLLQSLIQAEDVIKVHEARLTEKETTSLDLNELERYRATLKQMKSDLEHKRDLLTAME
SDLANAVHVNSQISASLHKCDVDLSKYAELVTQMSDRWRRIQTQIDSRVWDLEKQEKQLR
HFQQSSGVVDQWIDNARQRQDTLQTAKFSNIQAVMEHLNQQKVLHSEIKGKKEKVEDVQK
DADTCAASIKDYELQLASYSAGLETLLNIPIKRTMLQSPATVVRQEGADLQSRYIELLTR
SSDYYKFLGEMLKNMEELKIRNTKIEMLEEELRRLKEDIGGHSQKNRSLEDALSRYKLEL
SQSKEQLISMEEVKRTTAVQVSVARENLDNTSSQLTELNDKLARLTYQLDEEKRKKRLAE
ERYTSQQEEYEVAVRRRQKELDELNWSKIDLEKAVKDKERELERLRMQLEEEATRRRGAE
QEISKVRTQCNQEMSNLKQTFESEIHVTKTTILKASQQKQEDTAELKLQCEGLESDKRDL
EEELRRLRLSVTQTEAMRRKAEDEAHQQRSTGTEESRRRRELEIQLQTVATQRGEEELRQ
KEALAEATRSSKEKSRQIILLTHNLEEEGKKRSALEIELTKLRQSYTELQTSNATSREVI
NKLKISEQEIHLVRVELEKQTNERTKAETTATRLQSRIRDLMAMVDGLEAEMEKQKQTTQ
DEFTRRKRIESELEKMTQSCREHTTTLNTFRARQEEVSTSGRKYEQELRALQEALDKSLR
EHKATTEHLALASAELKALQQQLFQEQGKVREVNLRNESLYKTIEEKSRLLNDATTEIEK
LQSLTQNLTKERLRLEEELRGVKQEKEQLKLNRASVDGESQAQISSLHVQLQSSSKMTLE
LQALIKDLTKEREKLKSDLDKIQKQSIETSMIVQKSQTNYTEILSDRDALLIKLKQLEQD
RSHQGHYKEELNRIKVSLETELRNKQRLQEERDKMQKDFTYWKSQYELKENQMRQSDSDK
GKMERERLSLKSELERMIVELRTVEERYKGRLQSSEREVSDLALKRDALEKELQRRQQRP
DSMSIQTQTDEKVVTVDPSKLVFDGVRRKVTAHQLCDCGIISKATLEQLLKGKRTVEDVA
VDIQLSLKGTGVIAGMVRGPQGRMSITEAKTKNLLSKESALMLLEAQAATGHIMDPKFNE
KMSVDAASSRGVVDTDDRDTLMTAEAASAGFKDPYTGKLLSIGQALKLKRLDKETALRLL
QAQESVGGILDPVLSVFLPKDLALDRNLIDEDLYRALNKKPACYLDPVTEKKISYSDLML
KCRIEPASGMLLLSAPEKPMTVQGLRGEVSVTELIKSNLLTETDVQKLNQGKLSSKDIED
KLKNYLHGSNCIAGIYDEANNRAMTFYQAMKDGLLRQGTTLELLEAQAASGFMIDPVNNV
CLTVDEAWKRGLVGKEFKDKLMSAERAVTGYKDPHTGKTISLFQAIEKDLIEKGHGIRLL
EAQIASGGIIDPKESHRIDVDIAYKRGYFDEEMNEILTYEGDDTKGFFDPNTQENLTYLQ
LKERCITDPKTGLVLLPLRDKTKPQQTVQQSSQNTILRKRRVVIVDPDTGIEMTVREAYH
KELIDYDTFLSLSEQECEWEEITITASDGSARLVVVDRKTGTQYDIQDSLDRGIIDQTSL
EQYRSGTLTLPQFADLITSNSNLSELTMTARNMEDVATCSSPPQARPSSPTVRKRFNNIS
IIFSPPEEFDEGSPVAAIFDTETMEKITIPEALRRGLVDAITAQRLLEAQACTGGIINPT
NGQRLNLQDAVHQSIIDNDMATKLKPAQKAFMGFEDMKTKRKMSAAEAMKEKWLPYEAGQ
RFLEFQYLTGGLLEPGTGQKTSIEEAIRRGWLDGRGAQKLQDTRSHAKNLTCPKTKLKIS
YKEAMDSCMVEEGKGMKMLQASSISSKGISSPYNVSNPGSRSGSRTGSRTGSRSGSRRGS
VDYSSSYSSFTTSSSTTFSSN
NT seq
7806 nt
NT seq
+upstream
nt +downstream
nt
atgactatgtcctctgagactatagaccaactgaatgaatgtgccatagagctgcagcaa
atgagacaacccaacgacatcatcatcaggagcgtacagcagctccagagcatgcagagt
gggatcatctcctccatcagtgggacaacccagaggcagaacagaggaagcattggctgg
gaggagagagggaggtcctacgctgatgccatgtcctggataggccaacagaagcgtctg
atcgagacgtctccgtggggtgacgacgcagccaccatcgagcagcagatcctcagccag
aacaagttacacagctctatacagaggagccatgaggtggatcacgccagggatgaactg
gcccaaaaggatgacaagggtggcctccattccctgcagcaagaatgggacagtctgcag
aaaatgtcatttgctcgtacgggccagctgagagagctgcagaacatcatcgaggagatc
tccagggccatcatgtgggtcaacgagagagaggaggaggagctggtgttcaactgggga
gacaagaacatcgacgtctacatccccaagaaacaggagagctactccaaactgatgagt
gccctggaggagaaagagaaggagctgaacaaactgaagcagaaagtggatggtctcctg
aagaacaatcacccagcttcagacaagatagaggcctatatggacactctgcaaacccag
tggagctggctgctccagatcaccaagtgtattcatgtccacctgaaggagaacgctgcc
tacagccagttcttcaaggaggccaatgagacctacagcaagctgcaaaaggaccatgag
atcatccgtaagaagtttacctgtgataaaggaacacctctggagaacctcactgagctc
ctgaagaacctcgagagagagaaggagagggtcatggaaaataagaggcaggtgaagcac
ctggtgaataagtccaagagcatcgtgaggctgagaccacgtaaccctgaagagaagagc
agcacagctgttatagtacaggccctgtgtgacttcaaacaggaccagaaagggatctta
aagggggacgagggtatcctgaaggacaactcccagcgcagtaagtggcacgtgacgggt
cctggaggtctggacatgctgatcccatctgtgtgtctcctcatccccccgcccaacccc
ctaagcatcggcctggccaacaagaatgaacagtactatgaggctatcatgggcatctgg
aatcagctctacatcaacatcaagagcctcatctcctggcagtactgtgtcaaagacatc
aaccatatcaactccctcaccctcaccatgctgtcccagatgcgtcctgaggagtaccgt
aacatcattaagagtctggagactcactaccaggagttcctccgcaacagccacggctct
gagatgtttggagaggatgagaagaagaagatggagggccagtattctggagcccagagc
cactacgacacactggtcatagggctgcctacatacaatcaatccaacgtggtggtggtc
cagcctgagccgtccatcaaagctaacactaccaagatcaccaatacctcattgaaggag
accagcatctccacccagggctctaacatgagcctgaccctgctcagtgacctccaagcc
ctcagatgcaggctggagctggctgaatcaggcctcagccaccacctccatgtttccctg
ggggagaatagtgtgcaggagtgctcacagcacctcctgaagctggagggcatacacaat
gacctggacggtgtgcgtgatgagtacctgagactgagggagagggtggtgaagcagctg
gaggggacggcagcagactcggagcaggccaagttcctcaggaaagagctggatctcctc
aaccagaaactgggagatctgcaggggctgtcctctgcctacctccagagactgtcatat
ctgcagaacttgctccagagcctcatccaggctgaggatgtcatcaaggtccacgaggcc
cgtcttactgagaaggagaccacctccctggatctcaacgagttggagcgctacagagct
acactcaagcaaatgaagtctgacctggaacataagagagaccttctgacggccatggag
agtgacctggccaatgcagtccacgtgaacagtcaaatctcagcttccttacacaagtgt
gatgtggacctgtccaagtacgctgagctggtgacccagatgtctgaccgctggagacgc
atccagacccagatcgacagcagagtgtgggacctggagaagcaggagaaacagctgaga
catttccagcagagcagcggagtggttgaccagtggatagacaacgctagacagcgccag
gacaccctgcagacagccaagtttagcaacatccaggctgtcatggagcacctcaaccaa
cagaaggtgctgcacagtgagatcaaagggaagaaggaaaaggtggaggatgtacagaag
gatgcggacacctgcgctgcctccattaaggactatgagctgcagctggcctcctacagt
gcaggactggagaccctgttgaacatccctatcaagagaaccatgctccagtcccctgcc
actgtggtcagacaggagggtgctgacctccagtctcgctacattgagctcctgacccgc
tccagtgactattacaagttcctgggggagatgctcaagaacatggaggaactgaagatt
aggaacaccaagattgagatgctggaggaggagcttcgtcgtctaaaggaggacatcggg
ggccacagccagaagaaccgttccttagaggacgccctgtcccggtacaagctggagctc
tcacagtctaaagaacaactcatctccatggaggaggtgaagaggaccacagctgtgcag
gtcagcgtggccagggagaacctggacaacaccagcagccagctgactgagctcaacgac
aagttggcccgtctcacctaccagctggacgaggaaaagaggaagaagaggctggctgaa
gagcgctatacaagccagcaggaagagtacgaggtggccgtgcgccggcgccagaaggag
ctggacgagctcaactggtccaagatcgacttggagaaggcagtgaaggacaaggagcgc
gagctggagaggctgaggatgcagctggaggaggaggccacgaggaggcgtggggcggag
caggaaatctctaaggtaagaacccagtgcaaccaggagatgagcaaccttaagcaaacc
tttgagtcggagatccacgtcaccaagaccaccatcctcaaggcttctcagcagaaacag
gaggacacggccgagctcaaactacagtgtgagggactagaatcagataaaagggatctt
gaagaggagttgaggaggttgagactgtctgtgactcagactgaggcgatgaggaggaag
gcagaagatgaggcccatcagcagaggtctacagggacggaggagtcgaggaggaggaga
gagctggagatacagctccagactgtggccacccagagaggagaggaggagctgaggcag
aaggaggcgctggccgaggccaccaggagcagcaaggagaagagcaggcagatcattctt
ctgacacacaacctggaggaggagggcaagaagagaagcgccctggagattgagctcacc
aagctcaggcagtcgtacactgagctgcagaccagtaatgccacctctcgggaggtcatc
aacaagctcaagatctcagagcaggagatccacctggtccgagtggagctggaaaagcag
accaacgagaggaccaaggctgagacaactgccaccaggctgcagagccgcatccgggac
ctgatggctatggtggacggtctggaagcggagatggagaagcaaaagcaaacaacccag
gatgagttcacccgcaggaagaggattgagtctgagctggagaagatgacccagagctgc
agagaacacaccaccaccctcaacaccttcagggccaggcaggaagaggtgtccacctca
gggaggaagtacgaacaggagctcagggctctccaggaggctctggataagagcctgcgg
gagcacaaggccaccacggagcacctggcactggcatctgcagagttaaaggctctccaa
cagcagctcttccaagagcaggggaaagtccgtgaagtcaatctccgcaacgagagcctc
tacaaaaccatagaggagaagagccggctgctcaatgatgccaccacagagattgagaaa
cttcagagccttactcagaatctgaccaaggagaggctgaggctggaggaggaactgaga
ggagtgaagcaggagaaagagcaactaaaacttaacagagctagtgttgatggagagagc
caagcccagatctcatccctgcatgtccagctgcagagcagtagcaagatgacactggaa
ctccaagccctcatcaaggacctgaccaaggagagggaaaagctaaagtcggatttggac
aaaatccaaaagcaatccatagagacctccatgattgtgcagaagtctcagaccaactac
actgaaatcctgtcggatagggacgcccttctgatcaagttgaagcagctggaacaggac
aggtcccaccagggtcactataaagaggaactgaatcgcatcaaggtttccctggagact
gagctgcgcaacaaacagcgtctccaagaagaacgagataagatgcaaaaggacttcacc
tactggaagagccagtacgaactgaaggagaaccagatgaggcagagcgactcggacaag
ggcaaaatggagagggagagactctcgctgaagagcgagttggagcgtatgatagtggag
ctgaggaccgtggaggagaggtataagggcaggctgcagagttcagagagggaggtgtca
gacctggccctgaagagagacgccctggagaaggagttgcagaggcgtcagcagagacct
gactccatgagcatccagacccagacagacgagaaggtggtcaccgtggacccgtctaaa
ctggttttcgatggggttcgccgtaaggtcaccgcccaccagttgtgtgactgtggcatt
atcagcaaggccaccttggagcagctgctgaagggaaagaggaccgtggaggatgtggcc
gtcgacatccagcttagcctcaagggaacaggcgtcattgcaggcatggtcagaggaccc
cagggaaggatgtccatcactgaagccaagaccaagaaccttctgagcaaagagagtgcc
ctaatgctactggaggcccaagctgccaccggccacatcatggaccccaagtttaacgag
aagatgtctgttgatgctgcctcctccagaggagtggtggacacagacgatagagacacc
ctcatgacagctgaagcagccagtgcaggcttcaaagatccatacaccggcaagctgctg
tccattggacaggctctgaagctgaaacgtctggacaaggagacagccctccggttgcta
caggcccaggagtctgttggaggaatcctagacccagttctgagtgtgttcctgcccaaa
gaccttgcccttgaccgcaatctgattgatgaagacctctacagggctctgaacaagaag
ccagcctgctatctggatccagtcactgagaagaagatcagctacagtgacctaatgttg
aagtgtaggattgagcccgcctctggcatgctgctcctctcagccccggaaaagcccatg
accgtgcagggcctcaggggagaggtgtccgtcacagagctgatcaaatccaacttgctg
actgagacagatgtacaaaagctgaaccagggcaagctcagcagcaaggacatcgaggac
aagctcaagaactacctgcatggttctaactgtatagcagggatctatgatgaagccaac
aaccgggcaatgaccttctaccaggccatgaaggatggtctgctcagacaaggaaccacc
ctggagcttctggaagcccaggctgcctctggcttcatgatcgaccctgtcaacaatgtc
tgcctgactgtggatgaggcctggaagagaggccttgtgggcaaagagttcaaggacaag
ctgatgtctgcagagagggccgtcactggatacaaagacccacacactggcaagaccatc
tccctcttccaagccatcgagaaggatctgattgagaagggccatgggatcaggctgctt
gaggctcagatagccagcggtggcatcatcgaccctaaggagagccaccgtatcgatgta
gacatcgcctacaagaggggctacttcgacgaggagatgaatgagatcctgacctatgaa
ggagatgacaccaagggcttctttgaccccaacacccaagagaacctgacctacctgcag
ctgaaggagaggtgcatcacagaccccaagactggcctggttctcctacccctgagagac
aagaccaagccccagcagacggttcagcagagcagccagaataccatcctccgtaagagg
agggtagtgatcgtggaccctgacactggaatagagatgaccgtgagggaagcctaccat
aaggagctcattgactatgacaccttcctaagtctttcagagcaggagtgtgaatgggag
gagatcacaatcacagcttctgatggttcagcccgtctggtggtggtggacaggaagaca
ggcacccagtatgacatccaggactccctggaccgtggcatcattgaccagacctctctg
gagcagtaccgatcaggaaccctgactctccctcagttcgctgacctcatcaccagcaat
agcaacctcagcgagttgacaatgaccgccagaaacatggaggatgtggccacctgcagc
agccccccccaggcccgcccctcttcccccaccgtccgcaagcgcttcaataacatctcc
atcatcttctccccgccagaggagtttgacgaagggagccctgttgcggccatctttgac
actgagacgatggaaaagatcaccattccggaggctctacggagaggcttagtggacgcc
attacagctcagaggttgctggaggcccaagcgtgtactggaggcatcatcaaccccaca
aatggtcagaggctcaacctacaagatgctgttcaccaaagcatcattgacaatgacatg
gccaccaagctgaagccagcccagaaggcctttatgggctttgaggacatgaagaccaag
aggaagatgtctgcggccgaggccatgaaggagaaatggctgccttatgaggccggacag
agattcctggagttccaatacctgacaggaggtctgctggagcccggtacgggccagaag
acctctatcgaggaggcaatccgacgaggctggctggacggtcgtggagcccagaagctc
caggacacgcggagccacgccaagaacctgacctgccccaaaaccaagctgaagatctcc
tacaaggaggccatggatagctgcatggtggaggaaggcaaaggcatgaagatgctccag
gcctcctccatatcctccaagggcattagtagcccctacaacgtgtccaacccaggctcc
cgttcgggctccaggactggctctcgtacagggtctaggagtggctctcgcaggggcagt
gtggattactcctccagttacagctccttcacaacttcttcctccaccacctttagctcc
aactga
DBGET
integrated database retrieval system
