Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387502
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Entry
139387502 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: anti-dorsalizing morphogenic protein
KO
K21283
bone morphogenetic protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139387502
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139387502
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139387502
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139387502
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139387502
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Morphogens
139387502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
139387502
NCBI-ProteinID:
XP_070989865
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Position
28:41870956..41872952
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AA seq
416 aa
AA seq
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MLENKTXMLQGPTTRSMYHYLISEMLPVAMITAIATLVSMATARSSLNYLESHFSMENES
EEVRSAAIKRLLEVFGMEDAPLLRGDKQPPQYMVDLYNTVADVDGVTKDPYILEGNTVRS
FFDKLHSEQIEFLFNLSMVASSEKVLTAELHLFKLRPQVSATFNRYHFCQVSVYQLLDSS
KMNITQGKKLLSSRLIPVPSTGWEVFTITQAVRSWMAVEGNNLGLLVTVQTLGGSQMDEK
VVRFSSGRNHHKSKQPMLVLFTDDGRRAAALDNTVKDPNETPAVPGLSNLPNTPGFHRSA
RSLDYDEDVEKRTCQRLPLYVDFEEIGWSGWIVSPRGYNAYHCKGSCPFPLGQNMRPTNH
ATVQSIINALKLTKGIETPCCAPDKLFSINLLYFDDDENVVLKQYDDMVAGSCGCH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctagagaacaagacatagatgctccaaggacccacaacaagaagcatgtaccattac
cttatctctgagatgttacctgttgctatgatcactgccattgccacgttagtgagcatg
gctactgcaagatcatcactaaattatttggaaagccacttttccatggagaacgagtct
gaagaagtgcgttctgcagctatcaagaggctactggaggtgtttgggatggaggatgct
cctctcctccggggcgacaagcagccgcctcagtacatggtcgacctgtacaacactgtc
gcagatgtggacggagttaccaaggacccctacattctggaggggaatacagtacgcagc
ttcttcgacaaactgcacagtgaacaaatcgagttcctgttcaacttgtccatggtggcc
agtagtgagaaggttctaaccgcggaactccatctcttcaagctgcggcctcaggtttct
gcaacattcaatagatatcacttctgtcaggtcagtgtctaccagcttctggatagcagc
aaaatgaacattactcaggggaagaagctgctgtcttccagactgatccctgtcccctcc
actggctgggaagtgttcaccattacacaagctgtgcgttcctggatggctgttgagggc
aataacctgggtcttctggtcacagtgcagaccctgggaggaagccagatggatgagaag
gtggtgcgtttttcttcaggccgtaaccaccataaaagcaagcagcccatgctggtgctg
ttcactgacgatggccgccgtgcagccgctctggataatacagtcaaagatcccaatgag
accccagctgtccctggcctgtccaacctccccaacaccccaggcttccaccgcagcgcc
cgctccctggattatgacgaggacgtagagaagaggacgtgccagcgcctgccactctac
gtggacttcgaggagatcggctggtccgggtggatcgtgtcgcctcgggggtacaatgcc
taccactgtaagggctcctgccccttccccctgggccagaacatgagacccactaaccac
gccaccgtccagtctatcatcaacgctctgaagctgactaaaggcattgaaacgccgtgc
tgcgcgccagacaagctcttctccatcaacctgctgtattttgatgatgacgagaatgtg
gtgctgaagcagtatgatgacatggtggcaggaagctgcggctgccattga
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