Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387936
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Entry
139387936 CDS
T10872
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like
KO
K04943
potassium intermediate/small conductance calcium-activated channel subfamily N member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139387936
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
139387936
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Ion_trans
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
139387936
NCBI-ProteinID:
XP_070990432
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Position
29:26547892..26581855
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AA seq
682 aa
AA seq
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METPLQLKNDFFQEQQFQHHCKYQHYCGPEERSTKQRNQCCTCKNCTCGARKSLVFRGTS
AITQGTLRTPSVTSSRQGCQFSVCEFKPSSHGSSPRHHHHQHCHNRPRGSPSSSHKESNS
YNEIAMSSCRYNGGVMRPLSNLSSSRRNLHEFDSESQPLQPISTADASDTLASKPENNST
TLMPYASGDGGGGCNNSGSKSGKKKNQNIGQKLGHRRALFEKRKRLSDYALIFGMFGIVV
MVIETELSWGAYGKESLYSLALKCLISLSTIILLGLVIIYHAREIQLFMVDNAADDWRIA
MTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYTPSKTDADVDIILSIPMFLRLYL
IARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFTISLWIIAAWT
VRACERYHDNMDITSNFLGAMWLISITFLTIGYGDMVPNTYCGKGVCLLTGIMGAGCTAL
VVAVVAKKLELTKAEKHVHNFMMDTQLTKRVKNTAANVLRETWLIYKNTKLVRKMDHARV
RKHQRKFLQAIHQARKYIYWVLNGLLFRLRSVKMEQRKLNDQANSLVDLAKTQNIMYDLI
SDLNERGEDMEKRIALLETKLETLLGNLQALPGLISQVISQQHRDFLEVQLQPYNKHSPE
RSQSVSRRRSSSTAPPTSSESS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccattgcagttgaagaacgatttctttcaagagcagcagttccagcatcac
tgtaagtaccagcactactgcggaccagaggaacgctccactaagcagcgcaaccaatgc
tgcacctgcaagaactgtacctgtggtgcaagaaaaagcctagtttttcgcgggacgtcg
gcgatcactcaaggaactttaaggacgccatccgtaacgtcttcgagacaaggttgtcaa
tttagcgtctgtgagtttaagccctccagtcatggtagttcacccagacatcaccaccat
cagcactgccacaatcggccgcggggcagcccgagcagcagccacaaagagagtaactcg
tataacgaaatagccatgagcagctgcagatacaacggcggcgtaatgcggccgctgagc
aacttgagctcgtcccgcagaaacctacacgagtttgattcagagtcccagcctttacaa
ccaatttccaccgcagatgcatcggacaccctagcatctaaaccggagaacaattcgacc
accctgatgccttacgcatcgggagacggagggggtggatgtaacaacagtggcagtaaa
tcgggtaaaaagaagaaccagaacattgggcaaaagcttggacatagaagggccttgttt
gagaaaaggaagcgcctcagcgactatgctttgatcttcgggatgtttgggatcgttgtt
atggttatagagactgaactctcatggggagcatatggaaaggaatcgttgtattcatta
gctctaaaatgcctgataagcctttctacaatcattcttcttggtctggttatcatatac
cacgcaagggagattcagttattcatggtcgacaatgcagcagatgactggaggatagcc
atgacctacgagcgcatcttcttcatctgcctggagatcttggtgtgcgccatccacccc
atcccagggaactacaccttcacctggacagcgcgcctggccttctcctacaccccgtcc
aagacggacgcggacgtggacatcatcctgtccatccccatgttcttacggctgtatctc
atcgcccgcgtcatgctgctccacagcaagctcttcacagacgcctcgtcccgcagcatc
ggggcgcttaacaagatcaacttcaacacacgcttcgtcatgaagaccctgatgaccatc
tgccctggcaccgtgttgctggtctttaccatctcgttgtggatcatcgctgcgtggacc
gtgagggcctgcgagagataccatgacaacatggacataaccagcaactttctaggagcc
atgtggttgatatcaatcacttttctaaccattggatatggggatatggtacccaacact
tactgtggaaaaggagtctgtctcctcactggtattatgggagccggctgcacagccttg
gtagtggctgtggttgcaaagaaactggagttaaccaaagctgaaaaacatgttcataat
tttatgatggacacccagctgacaaaaagagtgaaaaacacagctgcaaatgtactgagg
gagacctggctcatctacaagaacaccaaacttgtgaggaagatggaccatgccagagtc
aggaagcaccagaggaaattcctccaagccattcatcaagctcgaaaatacatttattgg
gttctgaatggtcttctgttcagattgagaagtgttaaaatggagcaacgcaagctgaat
gaccaagcaaactcactagtggaccttgcaaagactcagaacatcatgtatgacctgatc
tcagacctgaacgagagaggggaggacatggagaagaggatcgccctgctggagaccaag
ctggagactttgctggggaacctgcaagccctgccaggactcatcagccaggtcatcagc
cagcagcacagggacttcttggaggtgcagctccagccgtacaacaaacacagccctgag
cgatcgcagtctgtgtccagacggaggtcatcctccactgcaccaccgacctcctccgag
agcagctag
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