Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388094
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Entry
139388094 CDS
T10872
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139388094
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139388094
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139388094
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139388094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Nup88
Motif
Other DBs
NCBI-GeneID:
139388094
NCBI-ProteinID:
XP_070990756
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Position
29:34750483..34772659
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AA seq
1074 aa
AA seq
DB search
MMNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSVEERAYLTAVEKGDYAGVKLALQEAE
IYYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLL
SHRRPSGEKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRC
DCVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENE
FRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDYLSEELDPKDCRDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRHHWAVKLVTCFTIGLLFPIFSLVYLLAPRSAL
GLFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIW
AEIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKLVAYFKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIVPSPKSVWYLCVWTYNRLCGGDQPSPDDLRKHENLKEFTERHADNLIQNQHYQ
EVIRNLVKRHVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSS
SEATQQDEANNEGEGGAGQGQSRDQGAKGVSFSMSTAERKSKDSGFSVSALFKSMSGVEG
PVDNKPKCNGLRFSSSSPSFAVFSRTGGQLQRFSKSKRDSIRRLGLLFSRMNGHVPEHRA
PPPCMHQPTYSISDGLLHQPTTWPDVHIAPDPQVTYSQFHLDRLGVNLKELPQAPTQAQA
PTQAQAPTQAQAPTQAPPQQANGSDSLLLRPPSLSLPPPGPSLPTPGHSLPPTGLSLPPL
HCASGIRASGIRASSSQAVLLGSSEDMYESWIGPCDELDSSEWWAEQDSITTQL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccatggcccagctgtactacaagaaggcgagctactcaccgtaccgcgac
cgcatcccgctgcagatcgtgcgggcggaagcggagctgtcagtggaggagcgggcgtac
ctgacggcggtggagaagggcgactatgccggggtgaagctggccctgcaggaggcggag
atctactacaacatcaacgtgaactgcctggacccgctggggcgcagcgctctgctcatc
gccatcgagaacgagaacctggaggtgatggagctgctgctcaaccacggcgtgcacgtg
ggcgacgcgctgctctacgccatccgcaaggaggtggtgggcgccgtggaactgcttctg
tcccaccgcaggcccagtggagagaaacaggtgcccaacctgatgatggatacccagttc
tcagagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactacgag
atcatcaaactgctggtccagcgcaaagtcaccatcccccggccacaccagatccgctgt
gactgcgttgcgtgcgtgtccagctccgaggtggacagcctgcgccactcccgctcccgc
ctcaatgtctacaagaccctagccagcccgtccctcatcgccctgtccagcgaagacccc
atcctgaccgccttccgtctgggctgggagctgaaagaactgagcaaggtggagaacgag
ttccgtcaggagtacgaggagctgtcccaacagtgtaagctgtttgccaaggacctgctg
gaccaggccaggagctccagagagctggagaccatcctcaaccaccgtgactacctcagt
gaggagctggacccaaaggactgccgcgacctggccaagctcaaactggccatcaagtac
caccagaaagagtttgtgtcccagccaaactgccagcagctcctggccaccctgtggtac
gacggtttccctgggtggcgcagacaccactgggcggttaagctggtcacctgctttacc
atcggcctgctcttccccatcttctccctggtctacctgctggcccctaggagtgccctg
ggcctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgact
ttccttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcacgtccag
ggcccaccacccaccgtggtggagtggatgatccttccctgggtgctgggcttcatctgg
gctgagataaaggagatgtgggacggcggcttcactgagtacgtccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccactatctcactaaaactagttgct
tacttcaagtacaacagctctcgaccgcgggaggagtgggagatgtggcacccaacgctg
atagccgaggccctgtttgctatcgccaacatcttcagctccctgcgcctcatctccctg
ttcacagccaactcccacctgggacctctgcagatctccctgggacgcatgttgctggac
atcctcaagttcctcttcatctactgcctggtgctgctggccttcgccaacgggctcaac
cagctgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatc
cgctgtgagaagcagaacaacgccttctctacgctgtttgagacgctgcagtccctgttc
tggtccatattcggcctgctcaacctgtacgtgaccaacgtgaaggcacgccatgagttc
acagagtttgtgggagccaccatgttcggtacctacaacgtaatctccctggtggtgctg
ctcaacatgctcatcgccatgatgaataattcctatcagctcatcgctgaccatgcggac
attgaatggaagtttgcccgtaccaagctgtggatgagttatttcgacgagggaggaact
ctccctccgcccttcaacatcgtccccagccccaagtcagtgtggtacttgtgtgtgtgg
acgtacaaccgcctgtgtggaggggaccagcccagccctgacgacctgaggaaacacgag
aacttaaaggagttcacggagcgtcatgctgacaacctgattcagaaccagcactatcag
gaggtgatcaggaacctggtaaagaggcatgtagcagccatgatccgcagtgctaagaca
gacgagggactgactgaggagaattttaaggagctgaagcaggacatctccagtttccgc
tatgaggtgttggatctgctggggaacaggaagcccccgcggagaacctattcatccagc
agtgaggccactcagcaggacgaggccaacaatgagggggagggaggggccggacagggt
cagtccagggaccaaggggccaagggggtgtccttcagcatgtcaaccgctgagaggaag
agcaaggactctgggttcagtgtctctgccctctttaagtccatgtcaggggtggagggg
ccagtggacaacaaaccaaagtgcaacgggctgcggttctcctcctcctccccttcattt
gctgtgttcagccgcactggtggccagctgcagcgcttctccaagtccaagagagactcc
atcaggcggctgggtctgctcttctcccgcatgaacggacacgtcccagagcacagagcc
cctcctccctgcatgcaccagcccacctacagcatctcagatggcctacttcatcagccc
acaacctggccagacgtccatatcgcccccgatccccaggttacatacagccagttccac
ctggaccggctgggggtgaacctgaaagagctaccccaggcccctacccaggcccaggcc
cctacccaggcccaagcccctacccaggcccaagcccctacccaggccccaccccagcag
gctaacgggagtgacagcctgctcctacggcccccgagcctctccctgccgcccccgggc
ccctctctaccgaccccgggtcactccctaccgcccacgggcctctccctgccacccctg
cactgtgcttctggcatcagggcctccggcatcagggcctccagctcccaggctgtcctc
ctgggctctagtgaggacatgtatgagtcctggataggaccttgtgatgagctggactct
tcagagtggtgggctgagcaggactccatcaccacacagctttag
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