Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389948
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Entry
139389948 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member 10B-like isoform X1
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04115
p53 signaling pathway
ocla04210
Apoptosis
ocla04217
Necroptosis
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139389948
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139389948
04217 Necroptosis
139389948
04115 p53 signaling pathway
139389948
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139389948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139389948
04090 CD molecules [BR:
ocla04090
]
139389948
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139389948
CD molecules [BR:
ocla04090
]
Proteins
139389948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
hEGF
MLANA
DUF5850
Motif
Other DBs
NCBI-GeneID:
139389948
NCBI-ProteinID:
XP_070993087
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All DBs
Position
30:complement(28821659..28838418)
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AA seq
427 aa
AA seq
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MSTPPLSMSYIHLMVVLIWALNPMAAAQSGLELTQTGGSVRNRKQRDISCRENLEYPHDN
ICCLNCPAGKYVKAYCTGALEKGTCEDCDLDTYTEHDNGLPQCLKCTKCRSDQVTTKTCT
ITQNTECQCKPGYFCAPDQACEVCKKCSRCKDNEVRVKNCTTTSNTVCETRLPTSSTISG
KTPGPVVVIVVAVLGITAALAGVYWMRRKPFKRTDTQNNPSGTLKVVVDDQNNRSIEERQ
NNQNAVLDDTQLYPLLEQTQAVGAKASEDEDNGLGDSLPNTTNSSQSSLSALPSAPLPRS
SPLPSPSAKRQPGSSAGENVLIKLVPLNGDESLKKSFELFEELDVHYHNRFFRHIGLSDN
AIKSSVHLHPEDRVYELLKVWLEKVGMDADMNDLIKALLYFGQRLSAENIISKAIENGYY
EYAENEK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgccacctttgagtatgagctatatacatttgatggttgtcctcatctgggcc
ctcaaccccatggcggcagctcaatctggccttgagttgacacagacaggaggcagcgtc
aggaacaggaaacagcgggacatctcatgcagggaaaacctggagtacccacatgacaac
atctgctgtttgaattgcccagctggtaaatatgtcaaagcgtactgcacgggtgccttg
gagaaaggaacatgtgaggactgtgacctcgacacatacacagagcatgacaacggactg
ccacagtgcttaaagtgcacgaagtgtcgctcagatcaggtaaccacaaagacatgcacc
atcactcagaacacagagtgccagtgtaaaccagggtatttctgtgcccctgaccaagcc
tgtgaggtgtgcaaaaagtgctcacgatgtaaagacaatgaggtgagggtgaagaactgc
accactacgtccaacacggtctgtgagaccagactgcccacatccagcaccatctcaggt
aaaactccaggcccagtagttgtgattgtggtggcagtactgggtatcactgctgcactt
gccggtgtctattggatgaggcgaaagccctttaaaaggacagacacccagaataatccc
agtgggacgctaaaagttgtggtggatgatcaaaataacaggtcaattgaggagaggcag
aacaaccagaatgctgtgctggatgacacacagctctatcccttgctggagcagacccag
gcggtgggtgccaaagcctcagaggatgaggacaatggactgggcgacagtctacccaac
accaccaactcctctcagtccagtctgtctgcactaccctcagcccccctccccagatcc
tccccgcttcccagcccttcggccaagaggcagcctggctcttcggctggggaaaatgtc
ctcataaaactggttcctttgaatggtgatgagtccttgaagaaaagttttgaacttttt
gaagagctggatgttcactaccataacagattcttcaggcacatcggactctctgacaat
gctataaaaagctctgtgcaccttcatcctgaagatcgagtctatgaactgttgaaagta
tggttggagaaggtgggcatggacgctgacatgaatgacctaatcaaagcgttactttat
tttggccaaaggttatcagcagaaaatattatttcaaaagccattgaaaatggttattat
gaatatgcagaaaatgaaaagtga
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