Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390456
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Entry
139390456 CDS
T10872
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Protocadherins
139390456
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GFIT
Other DBs
NCBI-GeneID:
139390456
NCBI-ProteinID:
XP_070993685
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Position
31:complement(26439628..26442096)
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AA seq
822 aa
AA seq
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MTKRMGYRDWRWLALWWHHSFLLWSTIDGQTRYTIPEELKQGSVVGNLAKDLGLGLSEIF
DRKLRVASEAGKQYFSVDAGKGELIVNERIDRDTLCGQSASCILPLKVVIENPLQLHRIE
VDIRDINDNSPTFLTKEQALKIAESTVAGVHFPLERAEDPDVGSNSFKSYTISKDDCFSL
KVKELRNGRKVPELVLEKPLDRERKAVHQLLLTALDGGSPVRSGTSQITITVLDVNDNIP
VFEKSVYKASIGENSAKGAFMVKLKATDKDDGQNGEVKYTFGEHTPESVLSTFDIDTETG
EMFLKGKLDYETAANFEIDITAKDKGIPEMEGHCSVQVEVVDLNDNAPEIVLTSQPSPVR
EDAPSGTVVALISAWDLDSGNNGKVTLQLPRDYNFSLKPSFSNNYALVTSGVLDRESFSG
YNIEITATDSGSPPLTTKKTIPVSIIDVNDNSPKFTQSSYNVYLKENGLPGSMLSSVSAS
DLDFGDNAKISYCILDSKVQGVSVSSYVYMNSDNGSIYSMHSFDYETLKVFQILVQAKDH
GSPSLSSNATVHVFILDQNDNAPAVIYPSAALGSLSHQKMPRSSKAGHLVTKVTAVDADS
GHNAWISYKLAEATDASLFNVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPVQSSTV
TVAILVEDGLQEPILDLRQKAPEPGKKSGRITLYLILSLASVSMLSLVTFVMLAVKCVRN
SRSSGSCCMRLDDLDGYNNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVSSEV
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggctggctctttggtggcatcattcc
tttctcttgtggagtacaatagacggacagactcgctacaccatcccggaggaactgaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgggactatctgagattttt
gaccgtaagctgcgtgtcgcttctgaggctggtaagcagtacttcagtgtagatgcgggg
aagggcgagctgatcgtcaatgagagaatagatagagacactttatgcggacaaagcgcc
agctgcattttacctctaaaggttgtaattgagaacccgttacagttacatcgaattgag
gtggacatacgagacataaatgacaattcccctacttttctcacaaaggagcaggcttta
aaaattgcagaatcgactgtagcgggtgttcattttccgctggagagagcagaggaccct
gacgtgggaagcaactcatttaaatcctataccatcagtaaagacgactgttttagttta
aaagtaaaagagcttcgtaatggaagaaaagtccctgaactggttttagagaaaccactt
gaccgagagagaaaagctgtccatcagctactattgacagcactagatggggggagtcca
gtcagatccgggacgtcacagataacaatcacagtgcttgatgtaaatgataatatccca
gtattcgaaaaatcagtgtataaagcttccatcggcgaaaatagcgcaaaaggcgctttc
atggttaaacttaaggcaacggataaagatgatggacaaaatggtgaggtaaaatataca
tttggtgagcacacacccgagtctgtactttctacatttgatattgatacggaaacagga
gagatgtttttgaaaggtaaattagattacgaaactgctgcaaactttgaaattgatatc
actgctaaagataaaggtatcccggagatggaaggacactgtagtgtgcaggtggaagtg
gttgacctgaacgacaatgctcccgaaatcgttctcacctcccaaccgagtccggtgcga
gaagatgcgccaagtggcacagtcgtggctttgatcagcgcctgggacctagactccggt
aataacggtaaagttacgttacaactcccgcgagactataattttagtttgaaaccgtca
ttttctaataattatgcactggtcaccagtggtgttttagaccgagagagcttctcgggg
tataatattgagataacagccacagattcgggctcccctcccctgactaccaagaaaact
atacctgtcagtatcattgatgtcaacgacaactcccctaaattcactcagtcctcctat
aatgtctatttaaaagagaatggactgccaggctccatgctctcctcagtatctgcatct
gacctggatttcggggataatgccaagatctcctactgtatcctggactccaaagtgcag
ggcgtgtctgtctcctcctatgtgtatatgaactctgataacggcagcatctacagcatg
cactcgtttgactatgaaacactgaaggtgtttcagattctggtgcaggcaaaggaccac
ggctctccgtctctgagcagcaacgccactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctccgctgccctgggctcgctctctcaccagaagatg
ccccgctcttctaaagcaggccacctggttactaaggtaacggccgtggacgcagactcg
ggtcataacgcctggatctcgtataaactggcggaggccacagatgcgtctctgttcaat
gtcaatctttacacaggggaagtaaggactaaacgcgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagagataaaggacgacggggaaccggtacagtcttccacggtc
acagtggccatactggtagaggacgggctccaagaacccatcttggacctccggcagaaa
gcgccagagcccggcaagaaaagcgggagaatcaccctgtatttgatcctctctctggcc
tcggtgtccatgctgtctctggtgacttttgtcatgttagcggtcaagtgcgttagaaac
agcaggagcagcggtagttgctgcatgagactggacgatttggacggctacaataacccc
aatagaaacctgcagatccagctcaacactgacgggcctattaagtacgtagaggtcctg
ggaggggacatgttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagag
ttcagtgatttcaccttcgttaagcccagcagcaccactgactttaaggagatgatcaac
gttctagacgcgtctttacccgacagcgcctggacctttgagagccagcaggtgagcagt
gaagtgtag
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